| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3585 |
|---|
| Symbol | |
|---|
| ID | 4786170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3792272 |
|---|
| End bp | 3793192 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640092167 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001022773 |
|---|
| Protein GI | 124268769 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.295986 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGCC GGCCTGAACC GCCGCAGCCC GAGACCGCGC GCCCGGTGGT GCTGGTGGTC
GACGACGCGC CCAGCAGCCT GGGCATGCTG TGCGACACGC TGGAGGACGC CGGCTACACG
GTGCTGATCG CGCGCGACGG CGAGGCGGCC CTGCAGCGGC TGCGCTTGGT GGTGCCCGAC
GTGATCCTGC TCGACGCGAT GATGCCGGGG ATGTCGGGCT TCGAGACCTG CCGCGTCCTC
AAGGCCGACC CGGCGCTGAC GCACATCCCG GTGATCTTCA TGACCGGGCT GTCGGAGACC
GCGCACGTGG TCGAGGGCTT CGCGTGCGGC GGGGTCGACT ACGTGGTCAA GCCGATCCGT
GCGCCCGAGG TGCTGGCGCG GCTGCACACG CACGCCCGCA ATGCGCGCAT CACGCGGCTC
GCGCGCGAGG CGGTCGACGT GGCCGGGCTG GGCGTGCTGC TGGTCGACGC GCACGGCCGC
ATCGCCTGGC GCTCGCCGCA GGCCGAACGC TGGCTCGCGG CCTGCGGCCC GGACGGTCCG
GGCAACGTGA TCGCGCCTGC CGAGGCCGGC ACCGAGCGCG TGTTCCAGAT GCCCGGCCCG
CTCGCGCCGC AGCGCCTGAC GCTGCGCAGC CTGGGGCCGG CCGGCATGGG CGAGACGATG
TGGCTGCTGG AGGTGCAGCG CGGCGACGGC AGCGACGGCG CCGCCTCGCC GTCCCGGCTC
AGCGCAGCGG CGCTGACGCC GCGCGAGACC GAAGTGCTGT CGTGGCTGGC CAAGGGCAAG
ACCAACCGCG ACATCGGCGA CATCCTCGGC GTGAGCCCCC GCACCGTGAA CAAGCACCTC
GAGCACATCT TCGAGAAGCT CGGCGTGGAG ACGCGCGCGG CGGCGGCGGC ACTGGCGAGC
ACGCAGTGGG GTGGCGATTA G
|
|---|
| Protein sequence | MDSRPEPPQP ETARPVVLVV DDAPSSLGML CDTLEDAGYT VLIARDGEAA LQRLRLVVPD
VILLDAMMPG MSGFETCRVL KADPALTHIP VIFMTGLSET AHVVEGFACG GVDYVVKPIR
APEVLARLHT HARNARITRL AREAVDVAGL GVLLVDAHGR IAWRSPQAER WLAACGPDGP
GNVIAPAEAG TERVFQMPGP LAPQRLTLRS LGPAGMGETM WLLEVQRGDG SDGAASPSRL
SAAALTPRET EVLSWLAKGK TNRDIGDILG VSPRTVNKHL EHIFEKLGVE TRAAAAALAS
TQWGGD
|
|---|
| |