| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3580 |
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| Symbol | |
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| ID | 4786164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3784445 |
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| End bp | 3787666 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640092161 |
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| Product | putative transmembrane multidrug-efflux system lipoprotein transmembrane |
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| Protein accession | YP_001022768 |
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| Protein GI | 124268764 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CCCGCTTCTT CATCGACCGG CCGATCTTCG CGGCCGTGCT GTCGGTCTTC
ATCACGCTGG TCGGCGCGAT CGCGATCTTC AAGCTGCCGA TCTCCGAATA CCCCGAGGTC
GCGCCGCCGC AGGTGGTGGT GCGCGCGCAG TTCCCCGGCG CCAACCCGCG CGTGATCGCC
GAGACGGTGG CCACGCCGCT CGAAGAGCAG ATCAACGGCA TCGAGAACAT GCTCTACATG
GGCAGCCAGG CCTCGGCCGA CGGTGCCCTG ACGCTGACGA TCAGCTTCAA GATCGGCACC
AACCCCGAGG TGGCCGAGAC CGCGGTGCAG AACCGCGTGA ACCGCGCGCT GCCGCGCCTG
CCCGAGGTGG TGCGCCAGAT CGGCGTGACC ACCGAGAAGA GCTCGCCGAA CCTGACCATG
GTGGTGCACA TGGTCTCGCC GGACAACAAG TACGACGCGC TCTACCTGCG CAACTACGCC
ACGCTCAACG TGCGCGACCC GCTGCTGCGC ATCCCGGGCA TGGGCTCGGT GCAGACCTTC
GGCTCGGGCG ACTACGCGAT GCGCATCTGG CTCGACCCGC AGAAGCTGTC GGCCCGCGGC
CTGACCTCGG CCGACGTGGT GGGCGCGATC CGCGAGCAGA ACGCGCAGGT CGCCGCCGGT
GTGGTGGGCG CGCCGCCGTC ACCGAACAAC ACCGAGTTCC AGCTCGCGAT CAACACCCAG
GGCCGGCTCA GCAGTGAGCA GGAGTTCGGC GACATCATCG TGCGCGCCGA CACCGCCGAC
GGTTCGGTGA TCCGCGTGCG CGACCTCGGT CGCGTCGAGC TCGGCCCCAA CACCTACTCG
CTCGGTTCGC TGCTGAACAA CAAGGAAGCA GCCGCGATCG GCATCTTCCA GGCGCCCAAC
TCCAATGCGT TGCAGCTGTC GAACGACGTG CGCGCCACGA TGGAGCGGCT GAAGGCCGAC
TTCCCGCCCG GCGTCGACTA CGCCATCGTC TACGACCCCA CGCGCTTCGT CGCCACCTCG
ATCGAGAAGG TGATCCACAC GCTGGTCGAG GCGATCGCGC TGGTGGTGCT GGTGGTGATC
GTGTTCCTGC AGACCTGGCG CGCGTCCATC ATCCCGCTGC TGGCGGTGCC GGTGTCCATC
GTCGGCACCT TCGCGGTGCT GCTTGCGCTG GGCTTCTCGA TCAACACCCT CACGCTGTTC
GGCCTGGTGC TGGCGATCGG CATCGTGGTC GACGACGCGA TCGTGGTGGT GGAGAACGTG
GAACGCAACA TCGAGGCCGG CCTGAGCCCG CGCGATGCGA GCGTGAAGGC GATGCAGGAG
GTGTCGGGCC CGATCATCGC CATCGGCCTG GTGCTGTGCG CGGTGTTCGT GCCGCTGGCC
TTCGTGTCCG GCCTGTCCGG CCAGTTCTAC AAGCAGTTCG CCGTGACGAT CGCGATCTCC
ACGGTGATCT CGGCGTTCAA CTCGTTGACC CTGTCGCCGG CGCTCAGCGC CATCCTGCTG
AAGCCGCACC ACGCGAAGAA GGACTGGTTG ACGCGCGGCA TGGACAAGGT GTTCGGCCGC
TTCTTCGGCT GGTTCAACCG TTTCTTCACG CGCAATGCCG ACCGCTACAG CCGCGGCGTC
ACCGGCACCG TCGTCAAGCG CAAGTCGATC GCGCTGGTGA TCTACGCAGT GCTGCTGGGT
GCCACCCTGC TGCTGTTCAA GCTGGTCCCG CCGGGCTTCG TGCCGCAGCA GGACAAGCAG
TACCTGATCG GCATCGCGCA GTTGCCCGAC GGCGCGAGCC TCGAACGCAC CACCAAGGTC
ATCCGCCAGC TCAGCGAGAT CGCGCTGTCG GTCCCGGGCG TGAAGAGTTC GGTGGCCTTC
CCCGGCCTGT CGATCAACGG CTTCACCGCG GCGCCCAACT CGGGCATCGT GTTCCTGAGC
CTCGACGAGT TCGAGAACCG CACGGCGCCG GAGCAGAGCG CCGACGCGAT CGTCGGGCAG
GTCAACCAGC GGCTGGGCGC GATCCAGGAC GCCTTCATGT TCGTGCTGTC GCCGCCGCCG
GTGAGCGGCC TGGGCAATGC CGGGGGCTTC AAGCTGCAGC TGCAGGATCG CGACTCGCTG
GGCGAGGGGG CGCTCAACGG TGCGGTGCAG CAGTTGATGG GCCGCATCTA CGGCAACCCC
AACAGCACGA TCACGCAGGC GTTCTCGAAC TACCAGATCA ACGTGCCGCA GCTGTTCGCC
AACGTCGACC GCACCAAGGC CAAGCAGATG GGGGTCAACC TCAGCGACAT CTACGAGACG
ATGCAGACCT ATCTGGGTTC GCTCTACGTC AACGACTTCA ACCGCTTCGG CAAGACCTAC
CAGGTGATCG TGCAGGCCGA CTCCGGCCAC CGCGCGAAGG CCGAGGACAT CGGCGCGCTG
AAGATCCGCA ACGCCGCCGG CGAGATGGTG CCGCTGTCGG CCATGATGCG CATCGAACCC
ACCTTCGGGC CGGGTTCGGT GGGCCGCTAC AACGGCTTCT ACACCGCCGA CTTCAACGGC
GCGGCCAAGC CCGGCTTCAG CTCCGGCGAG GCGCAGGCCG AGATGGAGAA GATCCTGAAG
GAGACGCTGC CGCGCGGCAT CAGCTACGAG TGGACCGAGC TGGTCTACCA GGAGAAGACC
GCCGGCAACA CGATGATCTA CATCTTCCCG CTGTGCGTGC TGCTGGTGTT CCTGGTGCTG
GCGGCCACCT ACGAGAGCAC CACGCTGCCG CTGGCGATCA TCCTGATCGT GCCGATGTGC
ATCCTGAGCG CGATCACTGG CGTGTGGCTC AGCGGCTTCC TGGGGCAGCC GGCCGACAAC
AACATCTTCA CGCAGATCGC CTTCGTGGTG CTGGTGGGGC TGGCGTGCAA GAACGCCATC
CTGATCGTCG AGTTCGCCCG CGAGCTGGAG GACCACGGCC GCAGCACCGT CAAGGCGGTG
GTCGAGGCTT GCCGCCTGCG GCTGCGTCCG ATCCTGATGA CTTCGATCGC CTTCATCGCC
GGCGTGATCC CGCTGGTGCT GTCCAGCGGC GCCGGCGCCG AGATGCGCCA GGCGATGGGC
ATCGCGGTGG CGAGCGGCAT GCTCGGCGTC ACCGTGTTCG GCCTGTTCCT GACGCCGGTG
TTCTACGTGC TGCTGCGCAA GCTCGCCCCC AAGAAGCACC TGCCCACCGC CCATGCCGCG
CCGCTGAAGC CGCGCGCCCC GACGGGAGAC GACCATGCGT GA
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| Protein sequence | MNLSRFFIDR PIFAAVLSVF ITLVGAIAIF KLPISEYPEV APPQVVVRAQ FPGANPRVIA
ETVATPLEEQ INGIENMLYM GSQASADGAL TLTISFKIGT NPEVAETAVQ NRVNRALPRL
PEVVRQIGVT TEKSSPNLTM VVHMVSPDNK YDALYLRNYA TLNVRDPLLR IPGMGSVQTF
GSGDYAMRIW LDPQKLSARG LTSADVVGAI REQNAQVAAG VVGAPPSPNN TEFQLAINTQ
GRLSSEQEFG DIIVRADTAD GSVIRVRDLG RVELGPNTYS LGSLLNNKEA AAIGIFQAPN
SNALQLSNDV RATMERLKAD FPPGVDYAIV YDPTRFVATS IEKVIHTLVE AIALVVLVVI
VFLQTWRASI IPLLAVPVSI VGTFAVLLAL GFSINTLTLF GLVLAIGIVV DDAIVVVENV
ERNIEAGLSP RDASVKAMQE VSGPIIAIGL VLCAVFVPLA FVSGLSGQFY KQFAVTIAIS
TVISAFNSLT LSPALSAILL KPHHAKKDWL TRGMDKVFGR FFGWFNRFFT RNADRYSRGV
TGTVVKRKSI ALVIYAVLLG ATLLLFKLVP PGFVPQQDKQ YLIGIAQLPD GASLERTTKV
IRQLSEIALS VPGVKSSVAF PGLSINGFTA APNSGIVFLS LDEFENRTAP EQSADAIVGQ
VNQRLGAIQD AFMFVLSPPP VSGLGNAGGF KLQLQDRDSL GEGALNGAVQ QLMGRIYGNP
NSTITQAFSN YQINVPQLFA NVDRTKAKQM GVNLSDIYET MQTYLGSLYV NDFNRFGKTY
QVIVQADSGH RAKAEDIGAL KIRNAAGEMV PLSAMMRIEP TFGPGSVGRY NGFYTADFNG
AAKPGFSSGE AQAEMEKILK ETLPRGISYE WTELVYQEKT AGNTMIYIFP LCVLLVFLVL
AATYESTTLP LAIILIVPMC ILSAITGVWL SGFLGQPADN NIFTQIAFVV LVGLACKNAI
LIVEFARELE DHGRSTVKAV VEACRLRLRP ILMTSIAFIA GVIPLVLSSG AGAEMRQAMG
IAVASGMLGV TVFGLFLTPV FYVLLRKLAP KKHLPTAHAA PLKPRAPTGD DHA
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