Gene Mpe_A3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3542 
Symbol 
ID4786185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3754497 
End bp3755042 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content71% 
IMG OID640092123 
Productputative cytochrome 
Protein accessionYP_001022730 
Protein GI124268726 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.510228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG CGCCCTCCCA CGACGACGAT CACGAGCCCA ATCACGAAGG CCCGATCCGC 
ACGCCCAAGC AGTTGGTGAT CGCGGTGGTC TTCGCCTTCG TGGTGCCGAT CGCCATCATC
GTGCTGCTGG CCAGCTACGT GAGCTCGGCC CAGAAGCCGG CCGCCGGCAG CGATGGCCTG
AAGGCCGAGG CCACCGCCGA GCGCATTGCC CCGGTCGGCA AGGTCGAGGT CAAGGACGCG
TCGGACGTGA GCGCGCTCAA GGGCGGCGAG GACGTGTACA AGGCGCAGTG CGCCGCCTGC
CACGCCGCTG GCGTGGCCGG GGCACCGAAG TTCGCCGATG CCGCTGCCTG GGGCCCGCGC
ATCACGACCG GCTACGAGGC CCTGCTGACC TCGGCGCTGA AGGGCAAGGG CGCGATGGGC
GCGCAGGGCG GCGGTGACTT CAGCGACGTC GAGATCGGCC GTGCGGTGGT CTTCATGGCC
AACGCCGGCG GGGCCAAGTT CGACGAGCCC AAGCCGCCGG CACCGGCGGC CAGCGCAGCG
CCCTGA
 
Protein sequence
MSAAPSHDDD HEPNHEGPIR TPKQLVIAVV FAFVVPIAII VLLASYVSSA QKPAAGSDGL 
KAEATAERIA PVGKVEVKDA SDVSALKGGE DVYKAQCAAC HAAGVAGAPK FADAAAWGPR
ITTGYEALLT SALKGKGAMG AQGGGDFSDV EIGRAVVFMA NAGGAKFDEP KPPAPAASAA
P