| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3442 |
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| Symbol | rplD |
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| ID | 4786316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3647752 |
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| End bp | 3648372 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640092020 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001022630 |
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| Protein GI | 124268626 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000201119 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.358981 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTCG AGCTCCTGAA CGAACAAGGC CAGGCCGCCT CGAAGGTCGA CGCGCCGGAC
ACCGTGTTCG GTCGCGACTA CAACGAAGCG CTGGTGCACC AGGTGGTGGT GGCCTACCAG
GCGAATGCCC GCCAAGGTAC GCGCGCCCAG AAGGATCGCC AGACGGTCAA GCACTCGACC
AAGAAGCCGT GGCGCCAGAA GGGCACCGGC CGGGCTCGCG CCGGCATGAC CTCGTCGCCG
CTGTGGCGCG GAGGCGGTCG GATCTTCCCG AACAGCCCGG AAGAGAACTT CAGCCACAAG
GTCAACAAGA AGATGTACCG CGCCGGCATG GCTGCCATCT TCTCGCAGCT CGCTCGTGAA
GGTCGCTTGG CCGTGGTGGA TTCGATCAAG GTCGAGACGC CCAAGACCAA GGCGCTGGCC
GCGAAGTTCA AGGCCATGGG CCTGGAGTCG GTGCTGGTGA TCGCGGACGA GGTGGATGAG
AACCTGTTCC TCGCGTCGCG CAACCTCGCC AACGTGCTGG TGATCGAGCC GCGTTATGCC
GATCCGCTGT CGCTGGTCTT CTACAAGAAG GTCCTGGTGA CGAAGGGCGC GATCGAGAAG
CTCAAGGAGA TGCTGGCATG A
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| Protein sequence | MELELLNEQG QAASKVDAPD TVFGRDYNEA LVHQVVVAYQ ANARQGTRAQ KDRQTVKHST
KKPWRQKGTG RARAGMTSSP LWRGGGRIFP NSPEENFSHK VNKKMYRAGM AAIFSQLARE
GRLAVVDSIK VETPKTKALA AKFKAMGLES VLVIADEVDE NLFLASRNLA NVLVIEPRYA
DPLSLVFYKK VLVTKGAIEK LKEMLA
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