| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3418 |
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| Symbol | rpsD |
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| ID | 4786350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3635650 |
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| End bp | 3636273 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640091996 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001022606 |
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| Protein GI | 124268602 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.122235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACGTT ATCTGGGTCC CAAGGCCAAA CTGGCCCGCC GTGAAGGCAC CGATCTGTTC
CTGAAGAGCG CGCGTCGCGC CATCGGGGAC AAGTCCAAGT TTGAAACCAA GCCGGGCCAG
CACGGCCGCA CCTCTGGCTC GCGCACCTCC GACTTCGGTC TCCAGCTGCG CGAGAAGCAG
AAGGTCAAGC GCATGTACGG CGTACTCGAG CGCCAGTTTC GCCGCTACTT TGCCGAGGCC
GAGCGCCGCA AGGGCAACAC CGGTGCGAAC CTGCTGCTGC TGCTCGAATC GCGCCTGGAC
AACGTGGTCT ATCGCATGGG TTTCGGTTCG ACCCGTGCCG AGGCCCGCCA GCTCGTTTCG
CACAAGGGCA TCACCGTGAA CGGTGAGGTC GTCAACATCG CGTCCTACCT GGTGAAGACC
GGTGACGTCG TCGCCGTGCG CGAAAAGGCC AAGAAGCAAT TGCGGGTGAC CGAGTCGCTC
AAGCTTGCCG AGTCGATGGG CTTGCCCGCG TGGGTGCAGG TCGATGCGAC CAAGCTCGAG
GGCGTATTCA AGAAGTCGCC CGACCGCGAC GAGTTCGGTT CGGACATCAA CGAATCCCTG
ATCGTCGAAC TGTATTCGCG TTGA
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| Protein sequence | MARYLGPKAK LARREGTDLF LKSARRAIGD KSKFETKPGQ HGRTSGSRTS DFGLQLREKQ
KVKRMYGVLE RQFRRYFAEA ERRKGNTGAN LLLLLESRLD NVVYRMGFGS TRAEARQLVS
HKGITVNGEV VNIASYLVKT GDVVAVREKA KKQLRVTESL KLAESMGLPA WVQVDATKLE
GVFKKSPDRD EFGSDINESL IVELYSR
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