Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3408 |
Symbol | pilY1 |
ID | 4786338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 3622953 |
End bp | 3626774 |
Gene Length | 3822 bp |
Protein Length | 1273 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640091984 |
Product | pilus tip-associated protein |
Protein accession | YP_001022596 |
Protein GI | 124268592 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0199627 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCCT ACCCAACCCC AGACCGCCAT TCCACGCAGA TGCGATGGAA TTGCGGCGAT CACGCCGGCC TCGGGATGGC TGGGCTTGCA AGAGCTCTGG TCTTGAGTTC AGTCTGGATG ACTTCGTCCT TGAGCGCGAA TGCCGCCACG GCTCTGGCAG ATGTCCCGGT GTTTGCAGGA ACCACGGTCC CAGGCAACGT GGCCTTGGCA CTTTCAGTGG AATGGCCGAC TGCGGTTCGT TCTGCTCACA CGACCGCGTA CGTGACGACC GATACGTATC TCGGCTATTT CGACCCGAAC AAGTGCTACA AGTACCAGTA CTACGCGACC GAGACCGCCA CGCAGCTGCG GCACTTCTAT CCGGTCGGCG ACAACACCGC GCACAACTGC ACCGGCACCG ACGAATGGAG CGGCAATTAC CTGAACTGGT CCTCGACACC GACGATCGAC CCGTTTCGCT GGGCAATGAC CGGCGGCTAC CGGATCATCG ACACAACCAC AACGACGATC CTCCAAAAGT CGCGTGACAC CAATCAGGGC CTGGCACCGG ACAAAAGCCT CACGGTGGCG GCCACCGTGG CGCAGGCTTC GCCGCTGGCC TTCACCAACC TCCATACGCG CATTCAAGGC CAGGGCATCA ACATGCTGTT CGCCTCGTCG TCGGCGGCGC TTGGCGGTGT CGTGGTCGAC TACAACCCGG CTGTCCCACC CGTGGCAGGC GTCGTCTACC GCGCTGTGAT GCGGGTGAAA GTCTGCGACT CCTCGGCGAC AGCCGGCACA CGCGAAGCCA ATTGCGTGCA GTACGGCAGC AACTGGAAAC CAGAAGGACT GGTTCAGAAA TATTCCAACC GTATCCGCTT CAGCGCCTTC GGCTACCTGA ACCATAGCGA CTTCCTGCGC GACGGCGCGG TGCTGCGCGC TCAGCAGAAG TTCGTCGGCC CGACACAGCC GGTCCCGGGC CAGCCGGCCG TCACGAACGC AGCGGCTGAA TGGGACGCGA CGACCGGCAT CTTTGCGATC AACCCCGATG CGGCCGACGC GACACAGACC AACGCGAGCT TCACGCCGAG CGTGTCGATC ACGAACAGCG GGGTGATGAA CTACCTGAAC AAGTTCGGTC AGCTCAACAC CAACAACTAC AAGAGCTACG ACCCCGTCAG CGAACTGTTC TACACCGCGC TGCGCTACTA CAAGAACCAG GGCAACGTTC CGGAGTACAC GGCGATGGGT ACCGCCAATG CTGCCACGCG GACGGCCTAC CTCGACGACT TTCCGGTCAT CACCAACTGG AACGACCCCA TCCTCTATTC GTGCCAGCGC AACTTCATTC TCGGCATCGG CGACATCTAC ACCCACCGCG ACAAGGATCT CCCCGGCTCC ACAGGTACAA CGGAAGAGCC GAATCCCAAA CCAGCGGCGG TCACGGGCGA TACCACGGTG AATGCCGAGA CCATGACCAA CCGAGCGTTC GCGCTGCAAG GTCTGGGCGC ACCGAACGTC AACAACTACA GCGGCCGCAA CAACTCGGCC GGCATCGTCG GCCTGGCCTA CTACGCCAAC ACCACCGACA TCCGACCCAC GGTGGCAGGC AATGCCGCCA CCGAGGGCAA GCAGACGGTC CAGACCTACT GGGTCGACGT GCTCGAGCAA CCTTTCGTCG CGAACAACCA GTTTTACCTC GCGGCAAAGT ACGGTGGCTT CACCGTGCCG AACGACTACG ACCCGGCCAC CCGCACCGCG GCGCTGCCGC AGGAGTGGTG GTCCACGACC GGCCAGACCG TCGGTACTCA GGCACGGCCC GACAACTACT ACACCGCCGG CCGTCCCGAC ACCATGGTCG CGGGCCTGAC GGCAGCCTTC GAGAAGATCG TCGCAGACCT GGACGCCTAC ACCACCTCGT TCTCCACCGT AGACCCGGTC CTGACCCTCA CCGGCAATGC GAGCTACAGC GCCTCGTACG ACGCGGAAAA CAACAGCTGG ACGGGCGAAT TGCTGGCGAA CTCGCTGTCG TTCAGCTCGG GCGTCCCCAT CCCCACACGG CAATGGGGCG CCACCGAGAA GTTGAAGACG CAGCTCACCG GCACGGGCTG GAGCACCAAC CGAAATGTGG TGACCTGGGA TCCTGCGGGC GCAACCGGCG TGGCATTTCG CTCTACCAGC ACCGGCGCCG GAAGAGTCAA TGCTGCCCAG CTTGCACTGC TCGACACGAG CTATGTTGCC GGGGACGACA GCGTCAACTA TCTGAATTAC CTTCGAGGTG ATCGGACGAA CGAACTGGCC TCGACGACCC CCGGTTACCG AACGCGCACG GAGTTGCTCG GCGACATCGT CGGGTCGCGT GTGTTGCCGG TCGGTCCGCC TTCGCTATCG CTGTCGGACG TCACCAACCC TGGCTATCGA GCATTCAGAG CGGCCCGTGC GAACCGCCCG ACCGTCGTTT ATGTCGGCGC GAACGACGGC ATGCTCCACG CTTTCAATGG CGCACTTTCG GGCACCGATG CCGGGCGTGA GATCTTCGCC TACATCCCGA ATGCAGCATT CAATGGCCCG GACGGAACGC CGAATGTGAG CGGTCTGGCC TCGCTAGGCC GCACTCCGTT CAATCATCGC TTCTTCGTGA ACGCCACGCC GGTGGTCAAG GACGTGGACT TCAACCGGAC CGGGACAGGC AGCACGCCGG CCTCGACGGC GTCCGATTGG CGGTCGATCC TGGTCGGCGG CCTTGGAAAG GGCGGGCGCA GCTTCTACGC GATCGATGTG ACCGATCCGG GCGGAATCAA CTCCGAAGCA GACGCTGCGG CCCGCGTGCT TTGGGAGTTC ACCGATTCAC GCATGGGCTA TTCGTTCGGC GAACCGATGA TCGTGAAGAC GCGCAAGTAC GGCTGGACGG TGATCTTCAC GTCGGGCTAC AACACACCCG ACGGTCAAGG CTACCTGTTC TTCGTGAATC CTAAGACGGG TGCGCTGCTC GAAGCGGTTT CTACTGGCGT GGGGACGATT GCCAACGATG CGGGCCTGGC GCACGCGAAC GCTTACGTGC TCGACTTCAC CGATGGCTAC GCTGACGCGA TCTACGCTGG CGATCTGCTC GGCAATCTCT GGCGGCTGAA CGTCACTGGC ACGACCGGAA GCTACCCTGC CCCGCTGCGA CTTGCCACAC TCAGCCACCC CACCGAAGGG GCTCAACCAG TGACTTCGCG GCCTCTGATC GAAGTGCACC CGACGACGCG CCAACGCGTG GTGATGATCG GCACCGGTCG CCTGTTGGAC TCGACCGACA TCGGGTCCGC CCAGATGCAA AGCTTCTACG CCATCACAGA TGGCAATGCG GTCGCCTTCA ACACCACGCT TCCGAGCGGC GTCTCGTTCC CGATCGGTCG TGACAAGCTG GTCGAGAACA CTAATCTCCT GGCGGGCTAC ACCGCCACGG CGGCCGCCCC CATGGGATGG TTCATCGATC TCGGCAAGAA CGCGAGCAAC ACGGTGGCAT GGCGGCTGAC CAATGACCCT ATCAGCTTCT TCGGCACCGT CGCCTTCACA CCCAGTTTGC CTGGTGGCGA CAGCTGCAAC CCCTCGGGCA TCAGCCGTAT CTACGGAGCG GATTTCTCCA GAGGTATCTC TCGATTGCTG GAGAACTCCA CGGTTGTCTC GTATATCCAG ACGACCAGCC TTATCACCGA CTTCAAGTTC GTGAAGGTCG ACGGCAAGAT GACGGCGATC CGCGGCGACG AGAAGGGTGA GTTGGGCAAG AACGATCTCA ATTTCGGTCT CCCTGTCGGA TTGAGGCGCT TGAACTGGCG CGAACTCCCG CTGTCGAACT GA
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Protein sequence | MKPYPTPDRH STQMRWNCGD HAGLGMAGLA RALVLSSVWM TSSLSANAAT ALADVPVFAG TTVPGNVALA LSVEWPTAVR SAHTTAYVTT DTYLGYFDPN KCYKYQYYAT ETATQLRHFY PVGDNTAHNC TGTDEWSGNY LNWSSTPTID PFRWAMTGGY RIIDTTTTTI LQKSRDTNQG LAPDKSLTVA ATVAQASPLA FTNLHTRIQG QGINMLFASS SAALGGVVVD YNPAVPPVAG VVYRAVMRVK VCDSSATAGT REANCVQYGS NWKPEGLVQK YSNRIRFSAF GYLNHSDFLR DGAVLRAQQK FVGPTQPVPG QPAVTNAAAE WDATTGIFAI NPDAADATQT NASFTPSVSI TNSGVMNYLN KFGQLNTNNY KSYDPVSELF YTALRYYKNQ GNVPEYTAMG TANAATRTAY LDDFPVITNW NDPILYSCQR NFILGIGDIY THRDKDLPGS TGTTEEPNPK PAAVTGDTTV NAETMTNRAF ALQGLGAPNV NNYSGRNNSA GIVGLAYYAN TTDIRPTVAG NAATEGKQTV QTYWVDVLEQ PFVANNQFYL AAKYGGFTVP NDYDPATRTA ALPQEWWSTT GQTVGTQARP DNYYTAGRPD TMVAGLTAAF EKIVADLDAY TTSFSTVDPV LTLTGNASYS ASYDAENNSW TGELLANSLS FSSGVPIPTR QWGATEKLKT QLTGTGWSTN RNVVTWDPAG ATGVAFRSTS TGAGRVNAAQ LALLDTSYVA GDDSVNYLNY LRGDRTNELA STTPGYRTRT ELLGDIVGSR VLPVGPPSLS LSDVTNPGYR AFRAARANRP TVVYVGANDG MLHAFNGALS GTDAGREIFA YIPNAAFNGP DGTPNVSGLA SLGRTPFNHR FFVNATPVVK DVDFNRTGTG STPASTASDW RSILVGGLGK GGRSFYAIDV TDPGGINSEA DAAARVLWEF TDSRMGYSFG EPMIVKTRKY GWTVIFTSGY NTPDGQGYLF FVNPKTGALL EAVSTGVGTI ANDAGLAHAN AYVLDFTDGY ADAIYAGDLL GNLWRLNVTG TTGSYPAPLR LATLSHPTEG AQPVTSRPLI EVHPTTRQRV VMIGTGRLLD STDIGSAQMQ SFYAITDGNA VAFNTTLPSG VSFPIGRDKL VENTNLLAGY TATAAAPMGW FIDLGKNASN TVAWRLTNDP ISFFGTVAFT PSLPGGDSCN PSGISRIYGA DFSRGISRLL ENSTVVSYIQ TTSLITDFKF VKVDGKMTAI RGDEKGELGK NDLNFGLPVG LRRLNWRELP LSN
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