Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3380 |
Symbol | |
ID | 4786367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3590697 |
End bp | 3592814 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640091956 |
Product | glycine--tRNA ligase |
Protein accession | YP_001022568 |
Protein GI | 124268564 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0350484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CCAAGAACCT GCTCGTCGAG CTGTTTGTCG AGGAACTGCC GCCGAAGGCG CTGAAGAAGC TCGGCGAATC CTTCGCCCAG ACGCTGGCCG AGAGCCTGAA GGCCCAGGGC CTGGCCACCG AGCACTCGGC CACCACTCCC TTCGCCTCGC CGCGGCGGCT GGCGGCACAC ATCAGTGCGG TGCTGCCGGC CGCGCCCGAC AAGGCGGTGT CGCAGAAGCT GATGCCGGTG AGCGTGGGCC TGACGGCCGA CGGCCAGCCC ACGCCGGCGC TGCTGAAGAA GCTCGCCGCG CTGGGCGCCG ACGCCTCGGC GCTGCCGCGG CTCGAGTGTC GCCCCGACGG CAAGGCCGAG GCGCTGTTCT TCGACAGCCT GGTGCCCGGC GCGATGCTGG CCGCCGGACT GCAGAAGGCG CTGCTCGAAG CGCTGGCGAA GCTGCCGATC CCCAAGCTGA TGAGCTACCA GCTCGAGACC GGCGAGCTGC CGGGCTGGGC CAGCGTGCAG TTCGTGCGCC CGGCCCACGG CCTGGTGGCG CTGCACGGCG CCGACCTGGT GTCGGTGGCC GCGCTCGGGC TCGAGTCGCG CCGTGAGACG CACGGCCACC GCTTCGAGGC GCAGATGGAC CCGGTGGTGC TGCAGCACGC CGACCACTAC GCGCAGCAGT TGCAGGACCA GGGCGCGGTG ATCGCCAGCT TCGCGGCGCG CCACGGCGAG ATCGCGCGCC AGCTGCAGGC CGCGGCCTCG AAGGAAGGCC TGGTGCCGAT CGACGACCCG GCGCTGCTGG ACGAGGTGAC CGCGCTGGTG GAGCGGCCCA ACGTGCTGCT CGGGCAGTTC GAGGAGAGCT TCCTGGCGGT GCCGCAGGAG TGCCTGATCC TCACGATGAA GGCCAACCAG AAGTACTTTC CGCTGCTCGA CGCGACGGGC CGGCTCACGC ACAAGTTCCT GATCGTCAGC AACATCAGCC CGGAGGACCC CAGCGCGGTG GTCGGTGGCA ACGAGCGGGT GGTGAGGCCG CGGCTGGCGG ACGCGAAGTT CTTCTTCGAT CAGGACCGCA GGAAGACGCT CGAGGATCGC GTGTCCGGTC TGGACAGGGT CGTCTACCAC GGCAAGCTCG GTACTCAGGG CGAACGCGTC GAGCGCGTGC GGGCCATCGC GCGGGCGATC GGCAGCCAGC TCGGCGGCGA GGCACTGGCG GCCAAGGCCG ACCAGGCCGC ACGGCTCGCC AAGGCCGACC TGCTGACCGA CATGGTGGGC GAGTTCCCCG AACTGCAGGG CACCATGGGC CGCTACTACG CGCAGCACGA CGGCCTGGGT GACGACATCG CGTTCGCGAT CGAGGACCAC TACCGCCCGC GCTTCGCCGG CGACGAACTG CCGCGCAACG AGGTCGGCAC CGTGGTCGCG CTGGCCGACA AGCTGGAGAC GCTGGTCGGC CTGTTCGGCA TCGGCCAGCT GCCGACCGGC GACAAGGACC CGTTCGCGCT GCGGCGGCAT GCGCTGGGCG TGATCCGGAT GCTGACCGAG AAGGCCTTGC CGCTCGAGGT CGATGCGCTG CTGAAGACGG CCTTGCCAGC GTTCGGCGCG CTGATCGCCG ACCCGTCGTC GGCGCTGGCC GAGTTCATCT TCGACCGCCT CGCCGGCAGC CTGCGCGAGC AGGGCTACCG CGCGCAGGAG GTCGACGCCG TGCTCTCGCT GCGCCCGCAG CGGCTGGGCG AGGTGGCGCA GCGCCTGGCG GCGGTGCGGG CCTTCGCGGC CCTGCCCGAG GCGCCCGCGC TCGCCGCGGC GAACAAGCGG GTCGGCAACA TCCTGAAGAA GGTGGACGGC GCGGTCGAGC CGAAGGTCGA CGCGGCGTTG CTGAAGGAGC CGGCCGAGGC CGCGCTGGCA CAGGCGCTGG CGGCGGTGAA ACCTGCGGCC GATGCCGCCT TCGCGCGCGG CGACCACGCG GCCTCGCTGC AGTCGCTCGC CGCACTGAAG GCGCCGGTCG ATGCCTTCTT CGACGGCGTG ATGGTCAACG CGGACGACCC GGCGCTGCGC GCCAACCGGC TCGGCCTGCT GGCCACTCTG CATGCCGCGA TGAACCGCGT GGCCGATCTC TCGAAGCTGG CGAGCTGA
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Protein sequence | MSDTKNLLVE LFVEELPPKA LKKLGESFAQ TLAESLKAQG LATEHSATTP FASPRRLAAH ISAVLPAAPD KAVSQKLMPV SVGLTADGQP TPALLKKLAA LGADASALPR LECRPDGKAE ALFFDSLVPG AMLAAGLQKA LLEALAKLPI PKLMSYQLET GELPGWASVQ FVRPAHGLVA LHGADLVSVA ALGLESRRET HGHRFEAQMD PVVLQHADHY AQQLQDQGAV IASFAARHGE IARQLQAAAS KEGLVPIDDP ALLDEVTALV ERPNVLLGQF EESFLAVPQE CLILTMKANQ KYFPLLDATG RLTHKFLIVS NISPEDPSAV VGGNERVVRP RLADAKFFFD QDRRKTLEDR VSGLDRVVYH GKLGTQGERV ERVRAIARAI GSQLGGEALA AKADQAARLA KADLLTDMVG EFPELQGTMG RYYAQHDGLG DDIAFAIEDH YRPRFAGDEL PRNEVGTVVA LADKLETLVG LFGIGQLPTG DKDPFALRRH ALGVIRMLTE KALPLEVDAL LKTALPAFGA LIADPSSALA EFIFDRLAGS LREQGYRAQE VDAVLSLRPQ RLGEVAQRLA AVRAFAALPE APALAAANKR VGNILKKVDG AVEPKVDAAL LKEPAEAALA QALAAVKPAA DAAFARGDHA ASLQSLAALK APVDAFFDGV MVNADDPALR ANRLGLLATL HAAMNRVADL SKLAS
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