| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3220 |
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| Symbol | |
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| ID | 4786559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 3424993 |
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| End bp | 3426366 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640091793 |
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| Product | signal recognition particle subunit FFH/SRP54 (srp54) |
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| Protein accession | YP_001022408 |
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| Protein GI | 124268404 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.604679 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.422678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCCG CCCTTTCCGA ACGCCTGAGC CGCCTGGTCA AGACCATGCG CGGCCAGGCC
CGCATCACCG AAGACAACGT GCAGGACATG CTGCGCGAGG TGCGCATGGC GCTGTTGGAG
GCCGACGTCG CGCTGCCGGT GGTGCGCGAC TTCATCGCCC GCGTGAAGGA AAAGGCACTG
GGTCAGGAGG TCGTCGGCTC GCTGTCGCCG GGGCAGGCGC TGGTGGGCGT GGTGCACAAG
GAGCTCGCGG CGACCATGGG CGCCGGCGGT GTGGCCGAGC TGAACCTCGC GACGCAACCG
CCGGCGGTGA TCCTGATGGC CGGCCTGCAG GGCGCCGGCA AAACCACGAC GACAGCCAAG
CTCGCCAGGC ACCTGATCGG GCGCAAGAAA AAGGTGCTCA CGGTGTCGGG CGACGTTTAC
CGGCCGGCCG CGATCGAGCA GCTGAAGACG GTGACCCAGC AGGCCGGCGC GGAGTGGTTT
CCGTCGCAGG CCAGCGACCA GCCGGTCGAC ATCGCGCTGG CCGCGGTGGA CTACGCGAAG
AAGCACTACT TCGACGTGCT GCTGGTCGAC ACCGCCGGCC GCCTGGCGAT CGACGAAGCG
ATGATGGCCG AGATCCGCGC GCTGCACGCG GCGCTGAACC CGATCGAGAC ATTGTTCGTC
GTCGACGCGA TGCAGGGCCA GGACGCGATC AACGTTGCCA AGGCCTTCAA GGAAGCGCTG
CCGCTGACCG GCATTGTTCT GACCAAGCTG GACGGTGACT CGCGCGGCGG CGCCGCGCTG
AGCGTCCGCC AGGTCACCGG CGCGCCGATC AAGTTTGCCG GCGTGTCCGA GAAGATCGAC
GGCCTGGAGC TGTTCGATGC CGAGCGCCAC GCCGGACGGG TACTCGGCAT GGGCGACATC
CTCGCGCTGG TCGAGCAGGT GCAGCAGGGC GTCGACCTGC AGGCGGCACA GAAGCTCGCC
GACAAGGTGA AGTCGGGCTC GGGCTTCGAC CTCGAGGACT TCCTCTCGCA GATCTCGCAG
ATGAAGAACA TGGGAGGCCT GTCGGGCCTG ATCGACAAGC TGCCCGCGCA GATGACCGGT
GGCAAGACGC CACAGCTCGG CGCCGCCGAC ATGGACCGTG CCGAGCGCGA CGTGCGTCGC
ATGGAAGGAA TCATCCGTTC GATGACGCCG CTCGAGCGGC GCAAGCCCGA GTTGCTCAAG
GCCAGCCGCA AGCGCCGCAT CGCCGCCGGC GCGGGCGTTC AGGTGCAGGA GGTCAACCGC
CTGCTGAACC AGTTCGAGCA GATGCAGGGG ATGATGAAGA AGATGAAGGG CGGCGGCATG
ATGAAGATGA TGAAGCGCAT GGGCGGCGGC GGAATGAAAG GATTTGTTCG CTAG
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| Protein sequence | MASALSERLS RLVKTMRGQA RITEDNVQDM LREVRMALLE ADVALPVVRD FIARVKEKAL
GQEVVGSLSP GQALVGVVHK ELAATMGAGG VAELNLATQP PAVILMAGLQ GAGKTTTTAK
LARHLIGRKK KVLTVSGDVY RPAAIEQLKT VTQQAGAEWF PSQASDQPVD IALAAVDYAK
KHYFDVLLVD TAGRLAIDEA MMAEIRALHA ALNPIETLFV VDAMQGQDAI NVAKAFKEAL
PLTGIVLTKL DGDSRGGAAL SVRQVTGAPI KFAGVSEKID GLELFDAERH AGRVLGMGDI
LALVEQVQQG VDLQAAQKLA DKVKSGSGFD LEDFLSQISQ MKNMGGLSGL IDKLPAQMTG
GKTPQLGAAD MDRAERDVRR MEGIIRSMTP LERRKPELLK ASRKRRIAAG AGVQVQEVNR
LLNQFEQMQG MMKKMKGGGM MKMMKRMGGG GMKGFVR
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