| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3219 |
|---|
| Symbol | |
|---|
| ID | 4786558 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3424062 |
|---|
| End bp | 3424886 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640091792 |
|---|
| Product | ABC-type uncharacterized transport system permease component-like protein |
|---|
| Protein accession | YP_001022407 |
|---|
| Protein GI | 124268403 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4137] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.368672 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAT CGCCCGGCCT CTCCGCTGCG AGCCTGCTGC CGCTGGCCGC GACGAGCATC
GTGGCGCTGC TGGCCTACCT TGTCGCTGCG TTCAGGCGCG AAGCCACATG GCTCGGCGTC
GTGCTGGCGG TCGGATGGAT CGGCCATGGC CTGGCCATCG GCCTCCACGC GGCCGGCGTC
GGCGAGGCGC AGCCGGGCGC TCGCTTCGGT TTCGCGCCCG CGCTGTCGGT GACGCTGTGG
CTGGTGCTGG CGGTGTATGC GATCGAAAGC CGCTTCGTGC CGCTGGCCGG CGTGCGGCGC
ACGCTGGCCG TGCTGGGTGC GGCTGCCGTC GTGCTGACCC TGGTGTTTCC CGGCGAACTG
CGCCCGCACG CTGGCTCACC GTGGGCGCCG TTGCACTGGA TCCTCGGCAT TGCATCGTAT
GGCTTGTTCG GCACCGCGCT GCTGCACGCC GCCTTGCTGC GGCGTGCGGA GCAGCGCCTG
CGCAGCAAGC CGGCGGCAGG CGAAGCGCCG CGCGTGCCGT CGCCCGGGCT GCCGCTGCTG
CGGCTGGAGA AGTTGACCTT CCGCTTCGTG GCGGCTGGCT TCGTCGTGCT GTCGGCCACG
CTGCTGCTCG GCTGGTGGTT CTCCTCGCCC TGGCGCTGGG ATCACAAGAG CGTGTTCTCC
GTGCTGGCCT GGGGTGTGTT CGCGGCCCTG CTCGCCGGGC GCCGCGCTTT CGGGTGGCGG
GGCCGGCTGG CGACGCGCTG GCTCTATGTG GGGGCCGGGC TGCTGCTGCT CGCCTACGTC
GGCTCGCGCT TCGTGCTGGA AGTGGTCCTC CACCGCACGA CCTGA
|
|---|
| Protein sequence | MILSPGLSAA SLLPLAATSI VALLAYLVAA FRREATWLGV VLAVGWIGHG LAIGLHAAGV
GEAQPGARFG FAPALSVTLW LVLAVYAIES RFVPLAGVRR TLAVLGAAAV VLTLVFPGEL
RPHAGSPWAP LHWILGIASY GLFGTALLHA ALLRRAEQRL RSKPAAGEAP RVPSPGLPLL
RLEKLTFRFV AAGFVVLSAT LLLGWWFSSP WRWDHKSVFS VLAWGVFAAL LAGRRAFGWR
GRLATRWLYV GAGLLLLAYV GSRFVLEVVL HRTT
|
|---|
| |