| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3118 |
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| Symbol | nikD |
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| ID | 4786631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3319173 |
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| End bp | 3320162 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640091689 |
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| Product | ABC type ATPase |
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| Protein accession | YP_001022306 |
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| Protein GI | 124268302 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0678938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGC CGCCCGGCCT GCTCGAGGTG CGCGATCTGG TGGTCGAGTT TCCCGGTCGT
CGCGGAACGC TGCGGGCGCT CGATGGCCTG TCGTTCGACA TTGCGCCCGG TGAGATCCTG
GGCGTGGTCG GCGAATCGGG GGCCGGCAAG TCGCTCACCG GCGCGGCCAT CATCGGACTG
CTGGCGCCAC CGGGGCGCAT CGCCGGCGGA CAGATCCGCC TGTCGGGCCA GCGCATCGAC
GACCTGCCGC CGGCCGCATT GCGCCGCATC CGTGGCCGGC GCATCGGCGC GATCTTCCAG
GATCCGCTGA CCTCGCTCGA CCCGCTGTAC ACCGTCGGCC AGCAACTGGT CGAGACCCTC
CGCACCCACC TGCCGCTCGA CGCACGCGCC GCGCGGGCGC GTGCCGTCGA GTTGCTGCGC
GACACCGGCA TCCCGGCGCC CGAGGCACGC ATCGACCACT ACCCGCACCA GTTCTCCGGC
GGCATGCGCC AGCGGGTCGT GATCGCGCTG GCGCTGGCCG CGAACCCGGA GCTGGTCATC
GCTGACGAGC CGACCACCGC GCTCGACGTG TCGATCCAGG CCCAGGTGAT CGACCTGCTC
AAGCGCCTGT GCAGGGAGCA GGGCGCCGCC GTGATGCTGG TGACGCACGA CATGGGCGTG
ATCGCCGAGG CCTGCGATCG AGTGGCGGTG ATGTACGCGG GGCGCATCGT CGAGATCGGC
ACGGTGCGCG ACGTGGTGCA CGCGCCGGGG CATCCGTACA CGGTCGGGCT GATGCGCTCG
ATCCCGTCGA TGAACGAAGA CCGCGAGCGG CTCGCGCAGA TCGACGGCAG CATGCCGCGG
CTGGACGCGA TCCCCGTCGG CTGCGCCTTC CATCCGCGCT GCCCACACGC CTTCGATCGC
TGCCGCACCG AGCGGCCGAT GCTGGCGGAC GCGGGCCGCA CGCGGGCGGC CTGCTGGCTG
GTCGAATCCG TCCCGGAGCG TCCGGCATGA
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| Protein sequence | MLKPPGLLEV RDLVVEFPGR RGTLRALDGL SFDIAPGEIL GVVGESGAGK SLTGAAIIGL
LAPPGRIAGG QIRLSGQRID DLPPAALRRI RGRRIGAIFQ DPLTSLDPLY TVGQQLVETL
RTHLPLDARA ARARAVELLR DTGIPAPEAR IDHYPHQFSG GMRQRVVIAL ALAANPELVI
ADEPTTALDV SIQAQVIDLL KRLCREQGAA VMLVTHDMGV IAEACDRVAV MYAGRIVEIG
TVRDVVHAPG HPYTVGLMRS IPSMNEDRER LAQIDGSMPR LDAIPVGCAF HPRCPHAFDR
CRTERPMLAD AGRTRAACWL VESVPERPA
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