| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A3113 |
|---|
| Symbol | pilQ |
|---|
| ID | 4786626 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 3312593 |
|---|
| End bp | 3313669 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640091684 |
|---|
| Product | fimbrial assembly protein |
|---|
| Protein accession | YP_001022301 |
|---|
| Protein GI | 124268297 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
|---|
| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.401806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCTTTC TAGACGGGTT GATGGGAGGC AAGCAAGCGC CGCTCGTCGG GCTGGACATC
AGCTCCTCGA GCGTCAAGCT CGTCGAGCTG GGTCAGTCCG CCTCGGGCCA GTACGTGCTT
GAACGTTTTG CCACCGAGAG TTTCGAGCGA GGCTGGATCG CTGACGGCCA GATCGAGAAA
TTCGATGAAG TGGCCGACGC GGTGCGCCGT GTCGTCAGCA AGAGCGGTAC CCGTTCCAAG
CGGGTGGCGA TGGCGATGCC ACAGTCGGCA GTGATCACGA AGAAGATCAT GCTGCCGGCC
GGCTTGCGTG ACGAGGAACT CGAACTCCAG GTCGAGTCCG AGGCCAATCA GTACATTCCG
TTTTCGCTGG ATGAGGTGAG CCTGGATTTC TGTGTCGTCG GGCCGAGCCC GTCCTCGGTC
GGCGACGTCG AGGTGCTGAT TGCTGCGTCG CGGAAAGATC GGGTGCAGGA TCGCCAGGGC
CTCGCCGAGG CCGCCGGGCT GAAGCCGGTC GTGCTGGATA TCGAGTCACA TGCCTCTCGT
CTGGCCATGA TGCGCATCGT CTCGGCCTTG CCTAACGAAG GGCGTGACGC GTTGGTGGCG
CTGTTCGAGA TCGGCGCCGA AACCACCAGC CTCAAGGTGC TTCGCGACGA GGAACTGCTT
TACGACCGTG ACCAAGCCTT CGGGGGGTCG CAGCTGACAC AAATGATCTC GCGCCAGTAT
GGCTTCTCGT TCGAAGAGGC CGAGCAGAAG AAGCTGGCCA GTGATCTTCC GGAGGACTAC
GAATCGAGTC TGCTGGTGCC GTTTGTCGAC AGTCTGGCGC AGGAGATCGG TCGGGCATTG
CAGTATTTCT TCACCAGCAC ACCGCATCAC AAGGTGCACT ACGTGATGTT GGGTGGTGGC
ACCGCAACCT TGCCTGGCTT GAAGGAGCGG GTGACCGAAT TGACGGGCTT TGCGTCGATG
GTCGTCAATC CTTTCGAAGG CATGCGCCTC GGGTCCGCTG TGCGCGAGAG CAAGCTGCGC
CGTGAAGCCC CGGCCTACCT GACCGCGTGC GGCCTGGCGA TGCGGAGGTT CCTGTAA
|
|---|
| Protein sequence | MGFLDGLMGG KQAPLVGLDI SSSSVKLVEL GQSASGQYVL ERFATESFER GWIADGQIEK
FDEVADAVRR VVSKSGTRSK RVAMAMPQSA VITKKIMLPA GLRDEELELQ VESEANQYIP
FSLDEVSLDF CVVGPSPSSV GDVEVLIAAS RKDRVQDRQG LAEAAGLKPV VLDIESHASR
LAMMRIVSAL PNEGRDALVA LFEIGAETTS LKVLRDEELL YDRDQAFGGS QLTQMISRQY
GFSFEEAEQK KLASDLPEDY ESSLLVPFVD SLAQEIGRAL QYFFTSTPHH KVHYVMLGGG
TATLPGLKER VTELTGFASM VVNPFEGMRL GSAVRESKLR REAPAYLTAC GLAMRRFL
|
|---|
| |