Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A3108 |
Symbol | aroK |
ID | 4786621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 3307871 |
End bp | 3308425 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640091679 |
Product | shikimate kinase |
Protein accession | YP_001022296 |
Protein GI | 124268292 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0973333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGG CACTGGTCGG GCTCCCCGGT TCAGGCAAGT CTTCGGTCGG CCGCGTGCTG GCGCGGAAAC TCGGCGTCAG TTTCACGGAT TCCGACACGG TGATCGAACA GCGGATCGGG GAACCGATCC GCTCCTACTT CGAGCGCGAG GGCGAAGGCC GATTTCGCGA TCTTGAGCAG CAGGTGATCG GCGAGCTCTG TGCCAGCCGG CTCGGCGTAC TGGCCACGGG CGGAGGTGCC GTCTTGCGGG AGGTCAATCG CCGCGTTCTG CACGAGGACT GCACGGTGCT CTACCTGCGA TCCTCGCCGG AAGAACTGCA CCGGCGCCTG CGTCACGACA CGCAAAGGCC GTTGTTGCAG GTCAAGGATC CTCGGGCCCG GTTGCAGCAG CTCTATCGCG AGCGCGATCC GCTGTACCGC GAGACTGCGC ATTTTGTCGT CGAGACGGGG AGGCCGACGG TCCAGACTCT GGTGGGCATG ATCCTGATGC AACTCGAGCT GGCCGGGATC GTCGATGCGA ACCGGGTGCC CTCCGCCGTC GAGCCGCCGC GCTAG
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Protein sequence | MRLALVGLPG SGKSSVGRVL ARKLGVSFTD SDTVIEQRIG EPIRSYFERE GEGRFRDLEQ QVIGELCASR LGVLATGGGA VLREVNRRVL HEDCTVLYLR SSPEELHRRL RHDTQRPLLQ VKDPRARLQQ LYRERDPLYR ETAHFVVETG RPTVQTLVGM ILMQLELAGI VDANRVPSAV EPPR
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