Gene Mpe_A3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A3108 
SymbolaroK 
ID4786621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp3307871 
End bp3308425 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content66% 
IMG OID640091679 
Productshikimate kinase 
Protein accessionYP_001022296 
Protein GI124268292 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0973333 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTGG CACTGGTCGG GCTCCCCGGT TCAGGCAAGT CTTCGGTCGG CCGCGTGCTG 
GCGCGGAAAC TCGGCGTCAG TTTCACGGAT TCCGACACGG TGATCGAACA GCGGATCGGG
GAACCGATCC GCTCCTACTT CGAGCGCGAG GGCGAAGGCC GATTTCGCGA TCTTGAGCAG
CAGGTGATCG GCGAGCTCTG TGCCAGCCGG CTCGGCGTAC TGGCCACGGG CGGAGGTGCC
GTCTTGCGGG AGGTCAATCG CCGCGTTCTG CACGAGGACT GCACGGTGCT CTACCTGCGA
TCCTCGCCGG AAGAACTGCA CCGGCGCCTG CGTCACGACA CGCAAAGGCC GTTGTTGCAG
GTCAAGGATC CTCGGGCCCG GTTGCAGCAG CTCTATCGCG AGCGCGATCC GCTGTACCGC
GAGACTGCGC ATTTTGTCGT CGAGACGGGG AGGCCGACGG TCCAGACTCT GGTGGGCATG
ATCCTGATGC AACTCGAGCT GGCCGGGATC GTCGATGCGA ACCGGGTGCC CTCCGCCGTC
GAGCCGCCGC GCTAG
 
Protein sequence
MRLALVGLPG SGKSSVGRVL ARKLGVSFTD SDTVIEQRIG EPIRSYFERE GEGRFRDLEQ 
QVIGELCASR LGVLATGGGA VLREVNRRVL HEDCTVLYLR SSPEELHRRL RHDTQRPLLQ
VKDPRARLQQ LYRERDPLYR ETAHFVVETG RPTVQTLVGM ILMQLELAGI VDANRVPSAV
EPPR