| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2857 |
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| Symbol | |
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| ID | 4785551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 3041072 |
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| End bp | 3043336 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640091428 |
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| Product | sensory box/response regulator |
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| Protein accession | YP_001022046 |
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| Protein GI | 124268042 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.917485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCTGC GCGCCGATCC CTCTGTCGAC GATCCTCTGG AGAGCCCTCG TGTTCTCCTG
GTCGACGACG ACGAGGTCAA CCTGCTGCTG ACATCGATCG CGTTGCGCGA GCGAGGCTTC
GCCGTCACCG AAGCCACCAG CGGCGAGCGC GCGGTGCAGT TGCTGACCGA CTGGTCGCCC
GACGTCATCG TGCTCGATGC GCTGATGCCC GGCATGGACG GCTTCACCAC CTGCCGAGAG
CTGCGCGCCT TGCCCGGCTT CGAGTCGATG CCGGTGCTGA TGCTGACCGG ATTGGATGAC
GATGCGTCGA TCACCCGTGC CTACGAGGCC GGCGCCACCG ACTTTTTCGT CAAATCGACG
CAGTGGAGTC TGCTGGCCGG ACGGCTGCGT TATCTGCTGC GCTCGTCCCG CACCCGACTG
GAGCTCGAGC GCAGCAAATC GAAGCTGGCA CGCGCGCAGG ATCTCGCACG CATGGGAAGC
TTCGACTGGC GGCGCGATCG CTCGGGGCTG CTGTTCTCGG TCGAGGGTTT GCGCGTCTTC
GGTCTGGGCC CGGGGGATCA CCTCGGCATG AGATCGCTCA TCCGCATGGT CCCCGCCGAG
CATCGGCAGG GCTGTCTGTC GCTGTTGCGG GATACGCTGG CCCGCAGCAC CGTGCTGGCC
ACCGATTTCC CGGTACAACT GATCGACGGG CGCCAGCGCG TGGTCCACGT CGAGGCCGAA
CCCGAGTTCA ACGAACACGG CAACCTGACC GGCTACACCG GCATCGTTCA GGACGTGACC
GACCGACGGG TGGCCGAGGA CAAGATCCGT CACCTGGCGA ACTTCGACGC ACTGACGGGC
CTGCCGAACC GGCGCCAGTT GATCTGGCGC GCCGAACGTG CGATGGAACA GGCCAAGCGG
CTGAACCATC AGGTGGGGCT GCTGCTGATC GACCTGGATC GCTTCAAGGT CATCAATGAC
ACGCTCGGGC ACGGGGCGGG GGACGAACTG CTGATGGAGG TGTCTCGGCG ACTGCGGTCC
TGCGTGCGGC ACTCCGACCA GGTGGTCGAG ACGGGGATCG ACTCGGTAGG TCTGCGCGCG
CATCGCTCGC TGGAGGCGGT CGGTCGTCTC GGCGGTGACG AGTTCGTGGC GTTGCTGCCC
GAGGTCGATG CTGACCAGGA TGCCGAGCGC GTTGCGCTGC GCATCCTCGA AGTGATGCGC
GAGCCCATCT TCGTGGGCGG CCAGGAATGC TTCGTGACGG CGAGCGTCGG CATCGCGCTG
TTCCCTCGGG ACGGCGCTTC GGTGGCCGAC GTGCTGCGCA ACGCCGATGT GGCGATGTAC
TCCGCCAAGG CAGCCGGACG CAACGCGGCA TCGCTCTACC GGCCGCATCT GGCCGGCAAG
GGCCGTGAGA AGCTCGAGCT CGAGAGCGCG CTGCACAAGG CCATCGAGCG CGAGGAACTG
GTGCTGCACT ACCAGCCGAA GATCGACGTG CGCACCGCGC GCATGGTCGG TGCCGAGGCG
CTGATGCGCT GGAAGCGCAA TGGCGTGTTG GTGCCGCCCG GCGATTTCAT CCCGCTGGCC
GAGGAGACCG GCCTCATCGT GCCGATGAGC GAGTGGGCCA TCCGCGAGGC CACCCGGCAG
GCGCGCCTGT GGCAGCAGCA CCATGGCATC GATACCTCGA TCGCGGTGAA CCTGCCGAGC
CGGCTGTTCG AGCGCACCGA CCTGGTGACC CACATCCAGC AGGCCGCGGC GGCGCACGGC
GTCACGCATT CCTGCATCGA GCTGGAGATC ACTGAAACCG GCCTGATGAA GGATCTGCAG
AACGTGATCC CGGCCTTGCA TCGACTCAAC GAGATCGGCG TCGAGATCTC CATCGACGAC
TTCGGCACCG GCTATTCTTC GCTCGCGTAC CTGACGACGC TGCCGATCAG CGAGCTGAAA
ATCGACCGCA GCTTCGTGCG TGACCTCGGC GTTACCTTGC AGAGTTCGGC TGTGGTGACG
GCGATCATTG CGCTGGCGCG CTCGCTCGGC ATCCGCGTGA TTGCGGAGGG CGTGGAGAAC
CTGCGCCAGA TGGAGGTGCT GCACCGCCTG GGCTGCAGCA CGATGCAGGG CTTCCTGTTC
AGCAAGGCCT TGCCGCCTGA AGACCTGGAG CAATGGCTGG CGCAGACCGT ATTGCCTCGC
AAGGCCCCGT GGATCGGGCA GGTGGAAGAC AGTGACGCCA CGGCGGAGTC GGTGCCGCGG
GCCGATGTGC GCGCCCTGCC GGGCAATCTG CCTCCGGGCG CCTGA
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| Protein sequence | MDLRADPSVD DPLESPRVLL VDDDEVNLLL TSIALRERGF AVTEATSGER AVQLLTDWSP
DVIVLDALMP GMDGFTTCRE LRALPGFESM PVLMLTGLDD DASITRAYEA GATDFFVKST
QWSLLAGRLR YLLRSSRTRL ELERSKSKLA RAQDLARMGS FDWRRDRSGL LFSVEGLRVF
GLGPGDHLGM RSLIRMVPAE HRQGCLSLLR DTLARSTVLA TDFPVQLIDG RQRVVHVEAE
PEFNEHGNLT GYTGIVQDVT DRRVAEDKIR HLANFDALTG LPNRRQLIWR AERAMEQAKR
LNHQVGLLLI DLDRFKVIND TLGHGAGDEL LMEVSRRLRS CVRHSDQVVE TGIDSVGLRA
HRSLEAVGRL GGDEFVALLP EVDADQDAER VALRILEVMR EPIFVGGQEC FVTASVGIAL
FPRDGASVAD VLRNADVAMY SAKAAGRNAA SLYRPHLAGK GREKLELESA LHKAIEREEL
VLHYQPKIDV RTARMVGAEA LMRWKRNGVL VPPGDFIPLA EETGLIVPMS EWAIREATRQ
ARLWQQHHGI DTSIAVNLPS RLFERTDLVT HIQQAAAAHG VTHSCIELEI TETGLMKDLQ
NVIPALHRLN EIGVEISIDD FGTGYSSLAY LTTLPISELK IDRSFVRDLG VTLQSSAVVT
AIIALARSLG IRVIAEGVEN LRQMEVLHRL GCSTMQGFLF SKALPPEDLE QWLAQTVLPR
KAPWIGQVED SDATAESVPR ADVRALPGNL PPGA
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