| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2447 |
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| Symbol | |
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| ID | 4784283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2607959 |
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| End bp | 2610856 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640091017 |
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| Product | signal transduction protein |
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| Protein accession | YP_001021637 |
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| Protein GI | 124267633 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.936876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCACC GCGATGCCGC ACTGACGCTC GTGGCGGCCA GCCCGACGCC GCCAGGCCCG
GAATACGCGT TGCGCGAAGT GCTTGACCGG CTGGGCCCCT CGGTGTTCGC GGGCCTGCTC
GACGCCGATG GCGTGCTGCG TTATGCCAAC CAGGCGGCGT TGCAGGCCAT CGGCGCCACG
CCGGAGCAGG TGCTCGGCCT GCGCTTCGAG ACCACCCCCT GGTGGCAGGG CTGCAAGTTG
TCGCAACGGC GGCTGCAGCA GGCGCTGGCC AGCGCATCGC GCGGCGAGGC ATCCCGTTTC
GACGTGCGCC TCGCCATCCG CGGCGACACG CTGGCCATGG ACTTTTCGCT GCTGCCGCTG
TACGGGCCCG ACGGACGCGT GGCCTGGCTG ATCCCTTCCG CGCATGACGT GAGCGAACGC
GAGCGGGCAC GGCGCCAGTT GCGCCTGACG CGCCATGCCG TCGAACAGGC CCACGACGCG
CTGTTCCTGG TCGGGCCCGA CGGTGCCTAT CGCGATGCCA ATGCAGCGGC TTGCCGGCTG
CTGGGCCTCA CGCGCAAGCA GCTGCTGCGC CTGCGGGTGC ACGACATAGA CACCCAGGTC
AACGAGACCT CCTGGCCACA GCGCTGGCAC GAGATGTGCG AACGCGGTTC GTCTCGTTTC
GAGACCAATG TTCGCCATCA CGATGGCCAT GAGATTCCTG TCGATGTCTC CGTCAGCCTG
GTGACCAGCG ACGGGGAGAC TTTCGCCCAC GTCTGCGTCG ACGACCTGCG CGATCGACGT
GCCGCAGAGC GGCGCATCCA GCAGTTGCTG CAGTTCGACG AGCTGACCGG TTTGCCGAAC
CGCCAGCGGC TCTTCGAGCA CCTGGGGGCC ACCCTGCAGA CCAGCGCCAC AACCGCGGTG
CTGGTGCTGG AGCTCGACCG CTTCAAGCGC ATCAACGACG GCCTCGGCCC CCAGATCGGC
GACGCCGTGC TGCGCGAAGT GGCCGGGCGC ATCGCCGCCA CCGTGCGCAG CGTCGACCTG
GTGGCGCGCC GCGGCGGCGA CGAGTTCGTG ATCGTGATGC CGGCCCCGTC GGTGCCGGCG
CCGCACGTGG CGCAGACGCT GCTCGAGACC ATCGCGCGGC CGATGACGAT CGAGGGGCAC
GAGATCCACC TCACCTGCGG CATCGGTATC GCCATGGCGC CCGCCGACGG CGACCGTGCC
GACACGCTGC TGCGCCGCGC CAACGCCGCG TTGGAACAGG CCAAGCGGCT GGGCCGCAAC
CAGGTCAACG TCTATGCCGG CGCGCCGCAT GATGACGACC CCGAACAGAT GGCGCTGGAG
ACCGCGCTGC GCCATGCGCT GCGCGACGAG CAGTTCGAGC TGCACTACCA GCCCCAGGTG
GATCTGGCGC AGGGCCGCAT CGTCGGCGTC GAAGCGCTGC TGCGCTGGCA GCACCCGACG
CTGGGGCGCA TCTCCCCGGA TCGTTTCATC CCGATCGCCG AGGAGACCGG CCTGATCGTT
CCCATCGGCG ACTGGGTGCT GCGCCACGCC ATCGAGCAGG CCGCGGCCTG GCAACGCGCC
AGGCTGCCAC CGCTTCGCAT GGCCGTCAAT CTGTCGGCGC GCCAGCTGCT GCAGCCGGAC
CTGGCGCGAC GCATCGAGGG CCTGCTCGCC GCAACCGGCC TCGACCCGCG GCGCTTCGGT
GTCGAGGTCA CCGAGAGCAT GCTGATCGGC AACTTCGATC AGGCGGTGCA GCACCTGCGA
GCGCTGCGTG CGCTCGGCGT CGAGGTCTCG CTCGACGACT TCGGCACCGG CTACTCGAGC
CTGAGTTACC TGCGGCGGCT GCCGGTGGAC GTCGTCAAGA TCGACCGCTC GCTGGTGCCT
GACGTCACCG CCCCGGCAGA AGACGTGTCG ATCACGCGCG CCATCATCAC GATGGCGCAC
CAGTTGCAGA TGAAGGTGCT CGCCGAAGGC GTCGAAAGCG AAGGCCAGGC GGCACTGCTC
GCCGCGAACC AGTGCGACCA GATGCAGGGC TGGTGGTTCA GTGCCGCACA GACGGCCGCA
GCGATCGAGG CGATGCTGCG CGAGGGCCGG CAGATCGATC CGGCGCTGCT CGGCCGGCGT
TCGCGGCAGC GCACCTTGCT GCTGGTCGAC GACGAGGAGA ACATCGTCGC CGCGCTGCGC
CGACTGCTGC GCGCCGAAGG CTGGCTGCTG CTCGGCGCCA CCGGCGCCGA AGAGGCGCTG
CAGCTGATGG CACGGCACGA GGTCGACGTG ATCCTGTCCG ACCAGCGCAT GCCGGGCATG
ACCGGCGTCG AGCTGCTGCG CCGTGCAAAG CAGCTGTACC CGGAAACGAT CCGGCTGGTG
CTCTCAGGCT ACACCGAGCT GCAGTCGATC ACCGACGCGA TCAACGAGGG AGCGATCTAC
AAGTTTCTCG CCAAGCCCTG GGACGACGAG CAGCTGCGGA CGCACCTGCG CGAGGCCTTC
GCGTTGAAGG AGATGGCCGA CCAGAACCGC CGCCTCGACG AGGAGGTGCA GGCTGCCAAC
CGCGAACTGG CCGAGCTGAA CCGGCGGCTG CAGACACTGC TGAGTGCGCA GCGCGAGCAG
AACGAGCGCG AGGTCGGCAG TCGCGAGGTG GCGCAGGAAC TGCTGGATGC GGTGCCGGTG
CCCGTGTTCG GCATCGACGA CGAAAACCTG CTGGTGTTCG TCAACGCACC GGCGCGGGCG
CTGTTCGGCC TGGATGGCAA CCTGCTGGGT AGGCCGGCGG CCGAGCAGCT GCCGCAGACC
TTGCGGCGGG CACTGGAGGG CGAGCCCCTG ATGCTCACGC TGGCGGGTCG CCGCTGGTGG
ACGATGAGCC GGCCGTTGAG CGGGAACGCG CGCGGCCGCC TGTTGGTACT GCTGCCGCAA
GCCGGCGCCT CGAAGTGA
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| Protein sequence | MPHRDAALTL VAASPTPPGP EYALREVLDR LGPSVFAGLL DADGVLRYAN QAALQAIGAT
PEQVLGLRFE TTPWWQGCKL SQRRLQQALA SASRGEASRF DVRLAIRGDT LAMDFSLLPL
YGPDGRVAWL IPSAHDVSER ERARRQLRLT RHAVEQAHDA LFLVGPDGAY RDANAAACRL
LGLTRKQLLR LRVHDIDTQV NETSWPQRWH EMCERGSSRF ETNVRHHDGH EIPVDVSVSL
VTSDGETFAH VCVDDLRDRR AAERRIQQLL QFDELTGLPN RQRLFEHLGA TLQTSATTAV
LVLELDRFKR INDGLGPQIG DAVLREVAGR IAATVRSVDL VARRGGDEFV IVMPAPSVPA
PHVAQTLLET IARPMTIEGH EIHLTCGIGI AMAPADGDRA DTLLRRANAA LEQAKRLGRN
QVNVYAGAPH DDDPEQMALE TALRHALRDE QFELHYQPQV DLAQGRIVGV EALLRWQHPT
LGRISPDRFI PIAEETGLIV PIGDWVLRHA IEQAAAWQRA RLPPLRMAVN LSARQLLQPD
LARRIEGLLA ATGLDPRRFG VEVTESMLIG NFDQAVQHLR ALRALGVEVS LDDFGTGYSS
LSYLRRLPVD VVKIDRSLVP DVTAPAEDVS ITRAIITMAH QLQMKVLAEG VESEGQAALL
AANQCDQMQG WWFSAAQTAA AIEAMLREGR QIDPALLGRR SRQRTLLLVD DEENIVAALR
RLLRAEGWLL LGATGAEEAL QLMARHEVDV ILSDQRMPGM TGVELLRRAK QLYPETIRLV
LSGYTELQSI TDAINEGAIY KFLAKPWDDE QLRTHLREAF ALKEMADQNR RLDEEVQAAN
RELAELNRRL QTLLSAQREQ NEREVGSREV AQELLDAVPV PVFGIDDENL LVFVNAPARA
LFGLDGNLLG RPAAEQLPQT LRRALEGEPL MLTLAGRRWW TMSRPLSGNA RGRLLVLLPQ
AGASK
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