Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2408 |
Symbol | |
ID | 4784304 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2571922 |
End bp | 2573775 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640090978 |
Product | integrase (int) |
Protein accession | YP_001021598 |
Protein GI | 124267594 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0582] Integrase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.71715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTCT CAGACTTGGC CGTTCGACAG GCCAAGGCAA CTGGCAAGGC ATACACCCTC CCTGACTTGG ATGGCCTCTC CCTGGCCGTC ACGGCTGCAG GGGGCAGGAC TTGGCACTTC CGCTACTACT GGGCGGGCAA GCAGAAGCGG ATGTCGCTCG GCACCTACCC GGAGGTGACG CTTCGCGAGG CCCGCAGCCT GCGCGATGAA GCGCGCGCCC TGCTAGCCAA AGGCATCAAT CCTCGCGTTC ACCGCAAGCA GAAGCGCACT GCCGTCCGGC TCGCCGACGA GAACACCTTC GAGGCGGTGT ATCGCAAGTG GCTCAAGCAT CGCGGGCTCA GCCTCAAGGA AGGCCGGCAG ACGACCCTCT CGATACTTCC ACGGATCTTC GACAAGGATG TGTTGCCCAC CTTGGGCAAG CGGTCGGTCT ATGAGATCAA GCGTCCCGAC CTCTTGGAGG TGATCGCCAA GATCGAGAAG CGCAGGGCAC TCTCCGTCGC CGAGAAAGTC AGGACGTGGT TCAACCAACT GTTTCGCTAC GCGCTGGTGA TCGTGCCGGG CCTGGAGCAA AACCCCGCCT CCGATCTCGA TGTGGTGGCG CTGCCGCTGC CACCCGTCAA CCACAACCCG TTCCTGCGCA TGGCCGAGCT GCCGAAGCTG TTGCAGCGGC TGCGCAGCTA TCGCGGCAGG CGGCAGACCC AGCTCGGGCT GCGGCTATTG CTGCTGACCG GCGTGCGAAC CGGCGAGCTG CGACAGGCGA CGCCGGATCA ATTCGATCTG GACCGTGGGT TGTGGATCAT CCCGCCCGAC GTCGTGAAGC AACTCCAGTT GGATATGCGC AAGAAGCGGC AGCAGCCAAA GGACATCCCG CCCTACATCG TGCCGCTGTC GATTCAGGCC ATGGAGATCG TCCGGCACCT GCTGGATGAG TTCAAGCCGG CCCAGCGCCA CCTGTTCCGG CACGACAGCG ACTTGAAGAA GCGCATCAGC GAGAACACGC TCAATGGTGC GCTCAAACGC ATGGGCTATC AGGAACGCCT GACGGGACAC GGTATCCGCG GCACGATGTC CACTGCGCTC AACGAGATCG GCTACCCGAA GGTCTGGGTG GATGCACAGC TCTCGCATGT CGATCCCAAC AAGGTCAGCG CGACCTACAA CCATGCCGAG TACGTGGAAC AGCGTCGCCG CATGATGCAG GACTGGGCCG ATCGGCTCGA CCTCTTCGAG CAGAACCAGG TCGAGGCGGC CAGCATGCCG CTCACCGTGC ATCTGGAAGG CGTGCCCGCG TTCCCGAATG AGCAAACCGC AAGCGCACCC TCCACGCCGG TTGCCGCTTC GCCAATCCTG CTCGTGACGA AGCCCGGCGA CGCCATGCCG TTGGTTTCTG CCGCCGCACA CCGGCTGCCG GCGGTTCCGC CCCCTCGGTC GGCCGCGCCG CTGGTGCCTT CGGACATTCA GCGCGAGAGG ATGGAACTGT TCGATGTCTT CGAAGCGCCG CACAACCTTC CCGTCGCGGC GTTTGCGAAG ATGGCGGGCA AGTCCCGCAG GTGGATCAGC TACGAGATCA AGGCCGGCAA CTTGCTGGCG TTGAACGTGG GCAACCGCGG CCAGCGGGTG CCGGACTGGC ACCTCGACCC ACTCAAGCAC GAGCTGATCC AGTCCGTCCT CAAGCTGACC AGGGGTGCGG ACCCTTGGCA GATCTACCAT GCACTGCTGC AACCGCGCTC GATGCTGCGG GGGCATTCGG CACTGGAGGG CGTGACGGCC GGCAATCTCG ACAAGCTCGT CATGGCAGTG AGCACAGCCG TGAAGGAAAG CGAATGGACC CCGCCGCGAG TCGGAGTCGC CTAG
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Protein sequence | MALSDLAVRQ AKATGKAYTL PDLDGLSLAV TAAGGRTWHF RYYWAGKQKR MSLGTYPEVT LREARSLRDE ARALLAKGIN PRVHRKQKRT AVRLADENTF EAVYRKWLKH RGLSLKEGRQ TTLSILPRIF DKDVLPTLGK RSVYEIKRPD LLEVIAKIEK RRALSVAEKV RTWFNQLFRY ALVIVPGLEQ NPASDLDVVA LPLPPVNHNP FLRMAELPKL LQRLRSYRGR RQTQLGLRLL LLTGVRTGEL RQATPDQFDL DRGLWIIPPD VVKQLQLDMR KKRQQPKDIP PYIVPLSIQA MEIVRHLLDE FKPAQRHLFR HDSDLKKRIS ENTLNGALKR MGYQERLTGH GIRGTMSTAL NEIGYPKVWV DAQLSHVDPN KVSATYNHAE YVEQRRRMMQ DWADRLDLFE QNQVEAASMP LTVHLEGVPA FPNEQTASAP STPVAASPIL LVTKPGDAMP LVSAAAHRLP AVPPPRSAAP LVPSDIQRER MELFDVFEAP HNLPVAAFAK MAGKSRRWIS YEIKAGNLLA LNVGNRGQRV PDWHLDPLKH ELIQSVLKLT RGADPWQIYH ALLQPRSMLR GHSALEGVTA GNLDKLVMAV STAVKESEWT PPRVGVA
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