| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2323 |
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| Symbol | alaS |
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| ID | 4783840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2491917 |
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| End bp | 2494544 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640090892 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001021514 |
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| Protein GI | 124267510 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0626442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCCT CCGAGATCCG TTCCGCCTTC CTGAAGTTCT TCGAGTCCAA GGGCCACCAG
ATCGTGGCCT CGAGCCCGGT GGTGCCCGGC GACGACCCGA CGCTGCTGTT CACCAATGCG
GGGATGAACC AGTTCAAGGA CGTGTTCCTC GGCTTCGACA AGCGCCCGTA CTCGCGCGCC
ACCACGGCAC AGAAGTGCAT CCGCGCCGGC GGCAAGCACA ACGACCTCGA GAACGTGGGC
TACACGGCGC GGCACCACAC CTTCTTCGAG ATGCTGGGCA ACTTCAGCTT CGGCGACTAC
TTCAAGCAGG ATGCCATCGC CTATGCCTGG GAGCTGCTGA CCGAGGTCTT CAAGCTGCCC
AAGGACAAGC TCTGGGTCAC CGTCTACGCG GAGGACGACG AGGCCTACGA GATCTGGAAC
AAGCAGGTCG GCGTGCCGGC CGAGCGCATC GTGCGCATCG GCGACAACAA GGGCGCGCGC
TACGCCTCCG ACAACTTCTG GATGATGGGC GACACCGGGC CCTGCGGCCC GTGCACCGAG
ATCTTCTACG ACCACGGCCC CGAGATCCCC GGCGGCCCGC CCGGTTCGCC CGACGAGGAC
GGCGACCGCT ACATCGAGAT CTGGAACAAC GTGTTCATGC AGTTCAACCG CGACGAGGCG
GGCGTGATGC ACAAGCTGCC CAAGCCGAGC GTGGACACCG GCATGGGCCT GGAGCGCATC
ACCGCGGTGC TGCAGCACGT GCACTCCAAC TACGAGATCG ACCTGTTCGT CGCGCTGCTG
GCGGCGGCCA AGCAGGCGGT GGACGCGGCC GGCGCAGGCG ACAGCGACAA GGACTCGCCG
TCGCTGAAGG TCATTGCCGA CCACATCCGC GCCTGTTCGT TCACCATCGT CGACGGCGTG
ATCCCCGGCA ACGAGGGCCG CGGCTACGTG CTGCGCCGCA TCGCCCGCCG CGGCATCCGC
CACGGCTACA AGCTCGGCGC CCGCAAGCCC TTCTTCCACA CGCTGGTGGC CGAGCTGGTG
CGCCAGATGG GCGAGGCCTA CCCCGAGCTG GCCCGCGCCG AGGCGCGCGT GACCGAGGTG
CTGAAGCAGG AGGAGGAGCG CTTCTTCCAG ACCATCGCCA ACGGGATGGA GATCCTGGAA
TCGGCCCTGG CCGGCGGCGC GAAGACCCTC GACGGTGAAA CCGCCTTCAA GCTGCACGAC
ACCTACGGTT TCCCGCTCGA CCTGACCGCC GATGTCTGCC GCGAACGCGG CGTGACGGTC
GACCAGGCCG GCTTCGACGC CGCGATGAAG CGCCAGCGCG AGCAGGCGCG CGCGGCCGGC
AAGTTCAAGA TGGCCGCCGG CCTCGAGTAC GCCGGTGCGG CCACCACCTT CCACGGCTAC
GAGCACCTGG TGCACGAGGG CTCGAAGGTC ACCGCGGTCT ACGTCGATGG TTCGGCCGTG
CCGAGCGCGA AGGCCGGCGA CGACGCGGTG ATCGTGCTCG ACCACACGCC GTTCTACGCT
GAGAGCGGCG GCCAGGTCGG CGACGGCGGC GAGCTGCGCA ACGGCACGAG CCGCGTGATC
GTGGAGGACA CGCAGAAGAT CCAGGCCGAC GTGTTCGGCC ACCACGGCCG CGTGGTCGAG
GGCGAGATCC GGGTCGGCGA CGTGCTGAAC GCGCGGGTCG ACGGGGAGCA GCGCGCCAGG
ACCGTGCGCA ACCACAGCGT GACCCACCTG ATGCACAAGG CACTGCGCGA AGTGCTGGGC
GGCCACGTGC AGCAGAAGGG CTCGCTGGTG AACGCCGAGC GCACTCGCTT CGACTTCGCG
CACAACGCGC CGATGAGCGA TGCGCAGATC GCGAAGGTGG AGGCGATCGT CAACGCCGAG
ATCCTGGCCA ACGCGCCGAC ACAGGCGCGC GTGCTGCCGA TGGAGGAGGC GCAGAAGCTC
GGCGCGATGA TGCTGTTCGG CGAGAAGTAC GGCGACGAGG TGCGCGTGCT CGACATCGGC
AGCAGCCGCG AGCTGTGCGG CGGCACCCAT GTGCAGCGCA CCGGCGACAT CGGGCTGTTC
AAGGTGGTCG CCGAGAGCGG CGTCGCGGCC GGCATCCGCC GCGTCGAGGC GATCACCGGC
GACAACGCGC TGGCCTACGT GCAGCAGCTC GAGGGCACGG TGGCCGGTCT GGCCGGCGCG
CTGAAGGCGG CGCCGGCCGA GGTGCCGGGC CGCGTCGCCG CGGTGCTGGA GCAGCTGCGC
ACGCTGGAGA AGGAGCTCGC CGCGCTGAAG GGCAAGCTCG CTTCCTCGCA GGGTGACGGG
CTGCTGGCAC AGGCCGTCGA CGTGAAGGGT CTGAAGGTGC TGGCGGCCCG GCTCGAAGGC
GCCGACGCGA AGGCGCTGCG CGACACCCTG GACCAGCTGA AGAACAAGCT CAAGAGCGCG
GCCATCGTGC TGGCAGTGGT GGAGGGCGGC AAGGTGCAGC TCGCCGCCGG CGTGACCGCC
GATGCGACCG CCCGGGTCAA GGCCGGCGAG CTGGTCAACT TCGTGGCGCA GCAGGTCGGC
GGCAAGGGGG GCGGCAAGCC GGACCTCGCG ATGGCCGGCG GCACCGATCC GGCCGGGTTG
GGGGCGGCGC TGGCTTCGGT GGCCGGCTGG GTCGGCGAGC GGGCCTGA
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| Protein sequence | MKASEIRSAF LKFFESKGHQ IVASSPVVPG DDPTLLFTNA GMNQFKDVFL GFDKRPYSRA
TTAQKCIRAG GKHNDLENVG YTARHHTFFE MLGNFSFGDY FKQDAIAYAW ELLTEVFKLP
KDKLWVTVYA EDDEAYEIWN KQVGVPAERI VRIGDNKGAR YASDNFWMMG DTGPCGPCTE
IFYDHGPEIP GGPPGSPDED GDRYIEIWNN VFMQFNRDEA GVMHKLPKPS VDTGMGLERI
TAVLQHVHSN YEIDLFVALL AAAKQAVDAA GAGDSDKDSP SLKVIADHIR ACSFTIVDGV
IPGNEGRGYV LRRIARRGIR HGYKLGARKP FFHTLVAELV RQMGEAYPEL ARAEARVTEV
LKQEEERFFQ TIANGMEILE SALAGGAKTL DGETAFKLHD TYGFPLDLTA DVCRERGVTV
DQAGFDAAMK RQREQARAAG KFKMAAGLEY AGAATTFHGY EHLVHEGSKV TAVYVDGSAV
PSAKAGDDAV IVLDHTPFYA ESGGQVGDGG ELRNGTSRVI VEDTQKIQAD VFGHHGRVVE
GEIRVGDVLN ARVDGEQRAR TVRNHSVTHL MHKALREVLG GHVQQKGSLV NAERTRFDFA
HNAPMSDAQI AKVEAIVNAE ILANAPTQAR VLPMEEAQKL GAMMLFGEKY GDEVRVLDIG
SSRELCGGTH VQRTGDIGLF KVVAESGVAA GIRRVEAITG DNALAYVQQL EGTVAGLAGA
LKAAPAEVPG RVAAVLEQLR TLEKELAALK GKLASSQGDG LLAQAVDVKG LKVLAARLEG
ADAKALRDTL DQLKNKLKSA AIVLAVVEGG KVQLAAGVTA DATARVKAGE LVNFVAQQVG
GKGGGKPDLA MAGGTDPAGL GAALASVAGW VGERA
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