Gene Mpe_A2161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2161 
Symbol 
ID4784850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand- 
Start bp2318501 
End bp2319628 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content66% 
IMG OID640090729 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_001021352 
Protein GI124267348 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.897266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.164606 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTCG TAGGATTGGT CGGCTGGCGC GGCATGGTAG GTTCCGTGCT GATGGATCGC 
ATGGTCGCCG AGCGCGACTT CGACCTCATC GAGCCGCTGT TCTTCAGCAC CAGCAACGCT 
GGCGGCGCGG CGCCAGCGAT GGCGAAGAAC GAGACGCGCC TGCAGGATGC GCACGACATC 
GCGGCGCTCA AGCGCTGCGA CATCATCATC ACGGCGCAGG GTGGCGACTA CACCACCGAG 
GTCTTCCCCA AGCTGCGCGC CGCAGGCTGG AAGGGCCATT GGGTCGATGC CGCCTCCACA 
CTGCGCATGA AGGACGATGC CGTCATCATC CTCGACCCGG TGAACCTGCC GGTCATCGAG 
AACGCGCTCG CCCAGGGAGG GCGCAACTGG GTCGGCGGCA ACTGCACGGT CAGCTGCATG 
TTGATGGGCG TGGGTGCGCT GTACAAGGCG GGTCTCGTCG AGTGGATGAG CTCGATGACC 
TACCAGGCGG CCTCGGGCGG CGGCGCACAG CACATGCGCG AACTGTTGAC GCAGTTCGGC 
ACCCTGAACG CCTCGGTCCG TGCGCTGCTC GACGATCCGA AGAGCGCGAT CCTCGAGATC 
GACCGCCAGG TCATCGACAC GCAACGTGGC CTGTCGGCCG AAGCGACCCA GCAATTCGGC 
GTGCCGCTGG GCGGCTCGTT GATCCCGTGG ATCGACAAGG ACCTCGGCGC AGGCGTCAGC 
CGCGAGGAAT GGAAGGCGGG CGCCGAGACC AACAAGATCC TCGGCATCGG CGAAGGCTTT 
GGCACGCCGG CGATCCCGGT AGACGGCTTC TGTGTGCGTG TCGGCGCCAT GCGCTGCCAT 
AGCCAGGCGT TGACCTTCAA GCTGAAGAAG GACGTGCCGC TGGCCGATGT GGAGGCCCTG 
ATCGCCCAGG ACAACGACTG GGTCAAGCTG GTGCCGAACA CGCGCGAGGC GACGATCCGC 
GACCTGACAC CGGTGGCCGT GACAGGCACG CTCGGCATTC CGGTCGGGCG CGTTCGCAAG 
TTGGCGATGG GCCCGGAATA CCTGGGCGCG TTCACGATCG GCGACCAGTT GTTGTGGGGT 
GCGGCCGAGC CGCTGCGGCG TATGCTGCGC ATCCTGCTGC AGGCTTGA
 
Protein sequence
MALVGLVGWR GMVGSVLMDR MVAERDFDLI EPLFFSTSNA GGAAPAMAKN ETRLQDAHDI 
AALKRCDIII TAQGGDYTTE VFPKLRAAGW KGHWVDAAST LRMKDDAVII LDPVNLPVIE 
NALAQGGRNW VGGNCTVSCM LMGVGALYKA GLVEWMSSMT YQAASGGGAQ HMRELLTQFG 
TLNASVRALL DDPKSAILEI DRQVIDTQRG LSAEATQQFG VPLGGSLIPW IDKDLGAGVS 
REEWKAGAET NKILGIGEGF GTPAIPVDGF CVRVGAMRCH SQALTFKLKK DVPLADVEAL 
IAQDNDWVKL VPNTREATIR DLTPVAVTGT LGIPVGRVRK LAMGPEYLGA FTIGDQLLWG 
AAEPLRRMLR ILLQA