| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2159 |
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| Symbol | truA |
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| ID | 4785823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2314821 |
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| End bp | 2315603 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640090727 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001021350 |
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| Protein GI | 124267346 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0844535 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGATTGG CCCTGGGCCT GAGCTATCGC GGCGGCGCCT ACCGGGGCTG GCAGAGCCAA
CCCGACGGAC TCACGGTGCA GGACCGGGTC GAGGAGGCCC TGGCCCGCTT CGCCGATCGG
CCGGTGCGCA CCGTGTGCGC CGGGCGCACC GACGCTGGCG TGCATGCGCT CAACCAGGTG
GTCCATCTCG ACACCGAGAT CGAGCGTGAG CCGTTCTCCT GGGTGCGCGG CACCAACCGC
TACCTGCCTC CTGATATCGC CGTGCAATGG TGCCGGCCGG TCGATGCCGC CTTCCACGCG
CGCAACAGCG CGCGTGGAAG GCGCTATGCC TACCTGCTGC TGGAGTCCCC CGTGCGGCCG
GCCATCGAGG CCGGTGCCGT CGGCTGGGTG TTCCGGCCAC TCGATGCGAC GCCCATGCGC
GAGGCGGCAG CCCACCTGAT CGGCGAGCAT GATTTCAGCG CCTTCCGCTC AGCCGAGTGC
CAGGCGGCCA GCCCGGTGAA GAACCTGAGG CGTATCGAGA TCGTTCGCTG CGGCGCCTAC
TGGCGTTTTG AGTTCGAGGC TAGCGCCTTT CTCCACCACA TGGTCCGCAA CTTGATGGGC
TGCCTGCTGG CCGTAGGGCA GGGTGTGCGA GCGCCGCAGT GGCTGGCCGA GGTGCTGGCC
GCGGGCGATC GCCGCCGGGC TGCGCCCACC TTTGCCCCGG ATGGCCTGTA TTTCCTCGGT
CCGCAATACG ATGCGAACCT CGACCTGCCC GAACGCACGC CCGCGTTCGA CTGGCTGCCC
TGA
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| Protein sequence | MRLALGLSYR GGAYRGWQSQ PDGLTVQDRV EEALARFADR PVRTVCAGRT DAGVHALNQV
VHLDTEIERE PFSWVRGTNR YLPPDIAVQW CRPVDAAFHA RNSARGRRYA YLLLESPVRP
AIEAGAVGWV FRPLDATPMR EAAAHLIGEH DFSAFRSAEC QAASPVKNLR RIEIVRCGAY
WRFEFEASAF LHHMVRNLMG CLLAVGQGVR APQWLAEVLA AGDRRRAAPT FAPDGLYFLG
PQYDANLDLP ERTPAFDWLP
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