| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2132 |
|---|
| Symbol | |
|---|
| ID | 4785796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2284935 |
|---|
| End bp | 2286968 |
|---|
| Gene Length | 2034 bp |
|---|
| Protein Length | 677 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640090700 |
|---|
| Product | oligopeptidase A |
|---|
| Protein accession | YP_001021323 |
|---|
| Protein GI | 124267319 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0694294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATC CTCTACTCGA TACCGCCGCC CTGCCGCGCT TCGGCGAGAT CCGCCCCGAG
CATGTGGAGC CTGCGGTCGA GGCCCTGCTG GCCGAAGCGA ACGTGGCGCT GGAACGCGCC
ACGGGCGCGG ACGTGCCGGC CGACTACGAT GCCCTCTCCG CGGTGCTCGA TGTCGCAACC
GAGCGCCTCG GGCGCGCCTG GGGAGCGGTC AGCCACCTCA ACGCGGTGGC CGACACGCCC
GAGCTGCGCG CCGCCTACAC CGAGGCCCTG CCGCGCGTGA CCGAGTTCTA CACGAACCTG
GGTGCCGACG AGCGGCTCTA CGCGAAGTAC AAGGCCGTGG CCGGCAGCCC TGCGGCAGCC
GCGCTCAACG CGGCACGGCG CAAGGCGCTG TCGAACGCGA TGCGCGATTT CGTGCTGTCC
GGCGCCGAGC TGCAGGGGGC CGCCAAGGAG CGCTTCGCAG CCATCCAGGC GCGTCAGGCC
GAACTCGGCC AGGCCTTCTC CGAGCATGTG CTCGACGCGA CAGACGGCTG GAGCTTCATC
GCGAGCGAGG CCGAGCTCGC CGGCGTACCG GAGGACGTCA AGGCCGCCAC GCGCGCCGCC
GCCCGGGCCG ACGGCCAAGA CGGCCACAAG CTCAGCCTGC ACATGCCGGT CTACCTGCCG
GTGCTGCAGT ACGCGCAGGA CCGCGCGCTG CGCGAACGCG TCTACCGCGC CCACGTCACG
CGTGCCTCGG AGGCCGGCCC GACCGAGCGC GACAACAGCG CCGTGATGGG CGAGATCCTC
ACTCTGCGGC AGGAAGAGGC CGAGCTGCTG GGCTACCGCA ACTTCGCCGA GGTTTCGCTG
GTCGCCAAGA TGGCCGACTC GCCGGCGCAG GTGCAGGGAT TCCTGCGCGA CCTGGCGCGG
CGCGCACGGC CCCACGCCGA GCGCGATCTG GCCGAGCTTC GCGAGTTCGC CCGCACCGAG
CTCGGCCTGG CCGATCTGCA GGCCTGGGAC ATGGCCTACG CGGCCGAGCG CCTGAAGGAA
GCCCGTTACG CCTTCAGCGA CACCGAGGTG AAGCAGTACT TCACCGAACC CAAGGTGCTG
GCCGGCCTGT TCCGCATCAT CGAGACGCTG TTCGAGGTGG CGATCCGCCC GGACACGGCG
CCGGTCTGGA ACGAGCACGT GCGATTCTTC CGCATCGAGC GCGGCACTCA GCTGGTCGGC
CAGTTCTACC TCGACCCCTA CGCACGCCCC GGCAAGCGCC CGGGCGCCTG GATGGACGAC
GTACGGGGTC GCTGGGCCCG CCCTGAGGGC AGGGTGCAGA CGCCGGTGGC TCATCTGGTT
TGCAACTTCG CTGCGCCCGT CGGTGACCGC CCCGCGCTGC TGTCGCACGA CGACGTGACC
ACGTTGTTCC ACGAGTTCGG CCACGGCCTG CACCACATGC TCACGCAGGT CGACGAGATC
GGCGTGGCCG GCATCTCCGG CGTCGAGTGG GACGCGGTCG AGCTGCCCAG CCAGTTCATG
GAGAACTTCT GCTGGGAGTG GGAGGTGGTG AAGCACATGA CGGCGCACGT CGACAGCGGC
GAGCCGCTGC CGCGGACGCT GTTCGACAAG ATGCTCGCCG CAAAGAACTT CCAGAGTGGC
TTGCAGACGT TGCGCCAGGT GGAGTTCTCG CTGTTCGACA TGCTGATCCA CGACGGTGCG
TCGGCGGCGC CCTACGGCGC CGACGCCATC CAGCGGGTGC TCGACGGCGT GCGCCGCGAG
ATCGCGGTCA TCGTGCCGCC GGCCTTCAAC CGCTTCCAGC ACAGCTTCTC GCACATCTTC
GCCGGCGGTT ACGCAGCCGG CTACTACAGC TACAAGTGGG CCGAGGTACT GAGCGCCGAC
GCCTACGCCG CCTTCGAGGA GGAAGGGGTG TTCAACCCCG CCGTCGGCCG CCGTTACCGC
GAAGCCATCC TCGAAGCCGG TGGCAGCCGT CCGGCGATGG AGAGCTTCAA GGCCTTCCGC
GGTCGCGAGC CACGCATCGA CGCCCTGCTG CGCCACCAGG GCATGGCGGA CTAA
|
|---|
| Protein sequence | MSNPLLDTAA LPRFGEIRPE HVEPAVEALL AEANVALERA TGADVPADYD ALSAVLDVAT
ERLGRAWGAV SHLNAVADTP ELRAAYTEAL PRVTEFYTNL GADERLYAKY KAVAGSPAAA
ALNAARRKAL SNAMRDFVLS GAELQGAAKE RFAAIQARQA ELGQAFSEHV LDATDGWSFI
ASEAELAGVP EDVKAATRAA ARADGQDGHK LSLHMPVYLP VLQYAQDRAL RERVYRAHVT
RASEAGPTER DNSAVMGEIL TLRQEEAELL GYRNFAEVSL VAKMADSPAQ VQGFLRDLAR
RARPHAERDL AELREFARTE LGLADLQAWD MAYAAERLKE ARYAFSDTEV KQYFTEPKVL
AGLFRIIETL FEVAIRPDTA PVWNEHVRFF RIERGTQLVG QFYLDPYARP GKRPGAWMDD
VRGRWARPEG RVQTPVAHLV CNFAAPVGDR PALLSHDDVT TLFHEFGHGL HHMLTQVDEI
GVAGISGVEW DAVELPSQFM ENFCWEWEVV KHMTAHVDSG EPLPRTLFDK MLAAKNFQSG
LQTLRQVEFS LFDMLIHDGA SAAPYGADAI QRVLDGVRRE IAVIVPPAFN RFQHSFSHIF
AGGYAAGYYS YKWAEVLSAD AYAAFEEEGV FNPAVGRRYR EAILEAGGSR PAMESFKAFR
GREPRIDALL RHQGMAD
|
|---|
| |