Gene Mpe_A2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A2122 
Symbol 
ID4784341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp2270201 
End bp2271082 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content61% 
IMG OID640090690 
ProductLysR family transcriptional regulator 
Protein accessionYP_001021313 
Protein GI124267309 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.874672 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.222342 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTAT TTGTGGAGTC GGTCAAGCGC GGCAGCCTTT CCGCTGCGGG ACGCCAGCTG 
AATCTGTCGC CATCGGCGAT CAGCAAGCTG CTATCGCGTT TGGAATCCAG GCTGGGCGTG
CGTCTGATCA ACCGCACCAC GCGCAGCCTC AGCCTGACCG AGGGAGGTGA GCGCTATTTC
AAGCGATGCC TGGAGATCCT GACCGACATA GAGAGCGCCG AAGATTCGCT GACCAGCTTC
GTGCGTGAGC CGACCGGAAC CCTGCGCATC AACAGCACTC AGGGCTTCGC CAAGCACCAG
CTGCTGGAGT TCATGGCTGA GTTTCAGGGG CGCTATCCGC GTTTGACGCT GGAACTCCAG
ATCACCGGGC AGGCGGTGGA CCTGATCGAC GAGGGCGTGG ATCTGGCGAT CCGACTGGGT
GAGTTGCGGG ATACGAGCCT TGTCGGCCGC AAGCTGGGTG AGAGCCAGCG TCTGGTTTGT
GCCAGCCCCC AGTATCTGAA CGCCAGAGGA CGTCCGACCC GGCCATCGGA TCTGTTGGAT
CACGATTGCC TTCGCCTGTC CACCAGCGAT GTTTTCAATC AGTGGCATTT CAGCGGCGCC
ACGGGACCGG AGCTGGTCAA TGTCCAGGGG CATTTCGTGA CCGACAACGT CGATGTGCTG
CATGAATACG CACGGCTGGG CGGAGGTATC GTCCGACTTT CCGCGTTCAT GGTGGCCAAG
GATATTGCGG CGGGACGCCT GGAGCCGCTG CTGACGAATT ACCACATCGA AAAGCAGTTG
ATCTACGCGG TCTATCCTCA CCGCAGGCAC TTGCCGGCGA AGGTGAGGGT GCTGCTGGAG
TACCTGACCG AGAAGTTTTC GCCGAAACCA CCCTGGAGTT GA
 
Protein sequence
MQVFVESVKR GSLSAAGRQL NLSPSAISKL LSRLESRLGV RLINRTTRSL SLTEGGERYF 
KRCLEILTDI ESAEDSLTSF VREPTGTLRI NSTQGFAKHQ LLEFMAEFQG RYPRLTLELQ
ITGQAVDLID EGVDLAIRLG ELRDTSLVGR KLGESQRLVC ASPQYLNARG RPTRPSDLLD
HDCLRLSTSD VFNQWHFSGA TGPELVNVQG HFVTDNVDVL HEYARLGGGI VRLSAFMVAK
DIAAGRLEPL LTNYHIEKQL IYAVYPHRRH LPAKVRVLLE YLTEKFSPKP PWS