Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2088 |
Symbol | |
ID | 4783667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 2236454 |
End bp | 2237815 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640090656 |
Product | putative ATP-dependent RNA helicase 1 |
Protein accession | YP_001021279 |
Protein GI | 124267275 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.936977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATTCA AAGAACTGGG GCTCGCCGAG CCCCTGCTGC AAGCCATCGT CGACGCCGGC TACGAGACGC CCACGCCGAT CCAGAAACAG GCCATTCCGG CCGTCATGCT GGGCGGCGAC CTGCTCGCCG GCGCCCAGAC CGGCACCGGC AAGACCGCCG GCTTCGTGCT GCCGATGCTG CACCGCCTGA TGGCCAGGCC GGCCGTCAAG GACGCTCGCG GCAAGAGCCC GGTGCGGGCG CTGATCCTCA CGCCGACCCG CGAACTGGCG GCGCAGGTGG AGGAAAGCGT GCGCATCTAC GGCAAGCACG CCAAGCTCAG CTCGATGGTG ATGTTCGGCG GCGTCGGCAT GCAGCCGCAG ATCGACCGCC TCAAGCGCGG CGTCGACATC CTGGTGGCCA CGCCCGGCCG CCTGCTCGAC CACCACCAGC AGCGCACGCT GGACCTGAGC CACGTCGAGA TCTTCGTGCT CGATGAAGCC GACCGCATGC TCGACATGGG CTTCATCCAC GACATCAAGA AGGTGCTGGC GATCGTGCCG AAGCAGAAGC AGAGCCTGCT GTTCAGCGCG ACCTTCAGCG ACGAGATCAA AACCCTGGCC GACCGCCTGC TGAACAGCCC GCAGGTGATC GAGGTGGCGC GCCGCAACAG CACCGTCGAG ACCATCGCGC AGAAGATCCA CCCGGTCGAC CGCGACAAGA AGAAGGAACT GCTGGCCCAC CTGATCAAGA GCCAGGATTG GCACCAGGTG CTGGTGTTCT GCCGCATGAA GCACGGCGCC AACCGCCTCA CCGAGTATCT GAACGACCAG CGCATCACCG CGATGGCGAT CCACGGCAAC AAGAGCCAGA CCGCGCGCAC CAAGGCGCTG GCCGACTTCA AGAGCGGCGC GCTCCAGGTG CTGGTGGCGA CCGACATCGC CGCGCGCGGC ATCGACATCG ACCAGTTGCC GCACGTCGTC AATTTCGAGC TGCCCAACGT GTCCGAGGAC TACGTGCACC GTATCGGCCG CACCGGCCGC GCCGGTGCCC TGGGCGAGGC CGTGTCGCTG GTCTGTGTCG ACGAGGACGG CTTCCTGCGC GATATCGAGA AGCTGATCAA GCGCAGCATC CCGCGCGAGG TCGTGCCCGG CTTCGAGCCC GATCCGCGTG CCGTGGCGCA GCCCATCCAG ATCGGACGGC AGACGCTCAA CGGCGGCCTG CGCTCTGGTG GCGGCGGCCG GGGCGGCGCG GGTCGTCCGG CGGGCGGTGG CGGTGGCGGC CGTGGGGGCC CCCGCAGTGC CGGCGGCGGC GCCCGCAGTG GCGGGGCCGG TGGCCCTCGC GGCGGTGGCG GCCACGGCGG GGGCGGTGGC CGCAGTCGCT GA
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Protein sequence | MSFKELGLAE PLLQAIVDAG YETPTPIQKQ AIPAVMLGGD LLAGAQTGTG KTAGFVLPML HRLMARPAVK DARGKSPVRA LILTPTRELA AQVEESVRIY GKHAKLSSMV MFGGVGMQPQ IDRLKRGVDI LVATPGRLLD HHQQRTLDLS HVEIFVLDEA DRMLDMGFIH DIKKVLAIVP KQKQSLLFSA TFSDEIKTLA DRLLNSPQVI EVARRNSTVE TIAQKIHPVD RDKKKELLAH LIKSQDWHQV LVFCRMKHGA NRLTEYLNDQ RITAMAIHGN KSQTARTKAL ADFKSGALQV LVATDIAARG IDIDQLPHVV NFELPNVSED YVHRIGRTGR AGALGEAVSL VCVDEDGFLR DIEKLIKRSI PREVVPGFEP DPRAVAQPIQ IGRQTLNGGL RSGGGGRGGA GRPAGGGGGG RGGPRSAGGG ARSGGAGGPR GGGGHGGGGG RSR
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