| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A2013 |
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| Symbol | sucA |
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| ID | 4784233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 2156115 |
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| End bp | 2158973 |
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| Gene Length | 2859 bp |
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| Protein Length | 952 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640090583 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_001021206 |
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| Protein GI | 124267202 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.430973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAGC AGTACCGGTC GAACTCGTAC CTGTTCGGGG GCAACGCGCC CTACGTCGAG
GAACTGTACG AGTCCTATCT CGACAACCCG GGTTCGGTCC CCGAGAAATG GCGCGCCTAC
TTCGACGCGC TTCAGCACGT ACCGGCCACC GACGGCTCCG AATCCCGCGA CGTGGCGCAT
GCGCCGGTCG TCGAATCCTT CGCGCAGCGC GCCAAGGCCA ACGCCTTCGC CGTCAAGGCC
AGCGCCGCCG AACTGGCGGT CGCGCGCAAG CAGGTGCACG TGCAGTCGCT GATCGCGGCC
TACCGCACGC TGGGCGCCCG CTGGGCCGAC CTCGACCCGC TCAAGCGCAC CGAGCGCCCC
AAGATTCCCG AACTGGAGCC GGCGTTCTAC GACCTGAGCG AGTCCGACAT GGACATCACG
TTCAGCGCTA CGAACACCTA CTTCACCACC GCCGAACAGC AGACGCTGCG TGAGATCCTG
CAGGCGCTGC GCGAGACCTA CTGTGGCTCC ATCGGCGCCG AGTTCATGCA CATCACCGAG
CCGGTCGAGA AGCGCTGGTG GCAGCAGCGG CTCGAAAGCG TGCGGGCCAA GCCGAGCTTC
TCCGCGGCGC AGAAGACCCA CATCCTCGAT CGGCTGACCG CCTCCGAAGG CCTGGAGCGC
TATCTGCACA CCAAGTACGT CGGCCAGAAG CGCTTCTCGC TCGAGGGCGG CGAGAGCTTC
ATCGCCTCGA TGGACGAGGT GGTGCAGCGC GGCGGCGAGC GCGGCGTCCA GGAGATCGTG
ATCGGCATGG CCCACCGTGG CCGCCTCAAC GTGCTGGTCA ACACGCTGGG CAAGATGCCC
AAGGACCTGT TCGCCGAGTT CGACCACACC GCCAAGGAAG AACTGCCGGC GGGTGACGTG
AAGTACCACC AGGGCTTCTC CAGCGACGTG ACCACGCCGG GCGGCCCGGT CCACCTGAGC
CTGTCGTTCA ACCCCTCGCA CCTGGAGATC GTGAATCCGG TGGTGGAAGG TTCCGTCAAG
GCGCGACTCG ACCGACGCGG CGACAAGGAA GGCGACACGG TGCTGCCGGT GCTGGTGCAC
GGTGACGCGG CCTTCGCCGG GCAGGGCGTG GTGATGGAGA CGCTGGCGCT GGCGCAGACG
CGTGGCTACT ACACCGGCGG CACGGTGCAC CTGGTCATCA ACAACCAGAT CGGCTTCACC
ACCAGCGACC CGCGCGACTC GCGTTCCACG TTGTATTGCA CCGACGTGGT CAAGATGATC
GAGGCGCCGG TGCTGCACGT GAACGGCGAC GATCCCGAGG CCGTGGTGCT GTGCACCCAG
CTCGCGCTCG ACTACCGGCA GGAGTTCAAC AAGGACGTCG TCGTCGACAT CATCTGCTTC
CGCAAGCTGG GCCACAACGA GCAGGACACG CCGTCGCTGA CCCAGCCGCT GATGTACAAG
AAGATCGCGG CCCACCCCGG CACGCGCAAG CTGTACGCCG ACAAGCTGGT CGCCCAGGGC
ACGCTGAAGC CCGACGAGCC CGACGCGATG GTGAAGGCCT TCCGTGCCGC GATGGACGCC
GGCAAGCACA CGGTCGACCC GGTGCTGACC AACTACAAGA GCAAGTACGC GGTCGACTGG
ACGCCCTACC TGAACCGCAA GTGGACCGAC GCGGCCGACA CCGCGCTGCC GCTGGCCGAG
ATCAAGCGTC TGGCCGAGCG CATCACGACC ATCCCGAAGG GCTTCAAGGT CCATCCGCTG
GTCGAGAAGG TGCTCGCCGA CCGCGCGGCG ATGGGCCGCG GCGAGATCAA CGTCGACTGG
GGCATGGGCG AGCACCTCGC CTACGCCTCG CTGGTGGCGA GCGGCTATCC GGTACGTCTG
TCCGGCGAGG ACTGCGGCCG CGGCACCTTC ACCCACCGCC ATGCAGTGCT GCACGACCAG
AACCGCGAGA AGTGGGACGA AGGTACTTGG ACGCCGCTGC AGCACGTGGC CGACGGCCAG
GCGCCGTTCG TCGTGATCGA CTCCATCCTG TCGGAAGAGG CGGTGCTCGG CTTCGAGTAC
GGCTACGCCT CGGCCGACCC GACCACGCTG ACGATCTGGG AAGCGCAGTT CGGCGACTTC
GTCAACGGCG CGCAGGTCGT GATCGACCAG TTCATCGCCT CCGGCGAGGT GAAGTGGGGC
CGCGCGAACG GACTCACGCT GCTGCTGCCG CACGGCTACG AAGGGCAGGG ACCTGAGCAC
AGCTCGGCGC GCCTCGAGCG CTTCATGCAG CTGGCGGCGG ACAACAACAT GCAGGTCTGC
CAGCCGACCT CGGCGAGTCA GATCTTCCAT CTGCTGCGTC GCCAGCAGGT GCGCATGTTC
CGCAAGCCGC TGGTGGTGAT GACGCCGAAG TCGCTGCTGC GCAACAAGGA CGCGGCGTCG
CCGCTGTCGG AGTTCACCCG CGGCGAATTC CGCACGGTCA TCCCCGAGCA GAACGCCGAC
ATCGACGCGG CCAAGGTCAA GCGCGTGATC GCGTGCTCGG GCAAGGTCTA CTACGACTTG
GTGAAGCGTC GCGACGAGAA GAAGAGCACC GACGTGGTGA TCCTGCGCGT GGAGCAGCTC
TATCCCTTCC CGCACAAGGC CTTCGCGACC GAATTGAAGA AGTACCCGAA CGCGACCGAC
GTGGTGTGGT GCCAGGACGA GCCGCAGAAC CAGGGCGCGT GGTTCTTCGT GCAGCACTAC
GTGCACGAGA ACATGCTCGA GGGGCAGAAG CTCGGCTACG CCGGCCGACC GGCGTCTGCC
TCGCCAGCCG TCGGCTACGC GCACCTGCAC CAGGAGCAGC TCAAGGCCCT GCTGGACCAG
GCCTACGGCA AGCTCAAGGG ATTCGTCCTG TCCAAGTGA
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| Protein sequence | MMQQYRSNSY LFGGNAPYVE ELYESYLDNP GSVPEKWRAY FDALQHVPAT DGSESRDVAH
APVVESFAQR AKANAFAVKA SAAELAVARK QVHVQSLIAA YRTLGARWAD LDPLKRTERP
KIPELEPAFY DLSESDMDIT FSATNTYFTT AEQQTLREIL QALRETYCGS IGAEFMHITE
PVEKRWWQQR LESVRAKPSF SAAQKTHILD RLTASEGLER YLHTKYVGQK RFSLEGGESF
IASMDEVVQR GGERGVQEIV IGMAHRGRLN VLVNTLGKMP KDLFAEFDHT AKEELPAGDV
KYHQGFSSDV TTPGGPVHLS LSFNPSHLEI VNPVVEGSVK ARLDRRGDKE GDTVLPVLVH
GDAAFAGQGV VMETLALAQT RGYYTGGTVH LVINNQIGFT TSDPRDSRST LYCTDVVKMI
EAPVLHVNGD DPEAVVLCTQ LALDYRQEFN KDVVVDIICF RKLGHNEQDT PSLTQPLMYK
KIAAHPGTRK LYADKLVAQG TLKPDEPDAM VKAFRAAMDA GKHTVDPVLT NYKSKYAVDW
TPYLNRKWTD AADTALPLAE IKRLAERITT IPKGFKVHPL VEKVLADRAA MGRGEINVDW
GMGEHLAYAS LVASGYPVRL SGEDCGRGTF THRHAVLHDQ NREKWDEGTW TPLQHVADGQ
APFVVIDSIL SEEAVLGFEY GYASADPTTL TIWEAQFGDF VNGAQVVIDQ FIASGEVKWG
RANGLTLLLP HGYEGQGPEH SSARLERFMQ LAADNNMQVC QPTSASQIFH LLRRQQVRMF
RKPLVVMTPK SLLRNKDAAS PLSEFTRGEF RTVIPEQNAD IDAAKVKRVI ACSGKVYYDL
VKRRDEKKST DVVILRVEQL YPFPHKAFAT ELKKYPNATD VVWCQDEPQN QGAWFFVQHY
VHENMLEGQK LGYAGRPASA SPAVGYAHLH QEQLKALLDQ AYGKLKGFVL SK
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