Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2004 |
Symbol | |
ID | 4783791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 2147111 |
End bp | 2147935 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640090574 |
Product | putative transmembrane protein |
Protein accession | YP_001021197 |
Protein GI | 124267193 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.519821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.271041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCGA TGCGTATGAG CCCTGCCGCC CACTGGCGCG CGACCCTGGC CGTGGTGCTG GCGGCCGCCA GCATCGGACT GATCGGATGT GCCGGCGGCC CGAAGGACGA GTTTGCCGGC AAGAGCACCG ACAAATTGTA CGAAGAGGCC CGCGACGAAG CCGCCAACGG CAACTGGGAG CGCGCCTCCA AGCTGTACGA GAAGCTCGAG GCGCGCACCG CCGGCACCCA GCAGGCGCAG CAGACGCAGA TCGACCTCGC CTACGCGTAC TACAAGACGA ACGAAAAGGC TCAGGCGCTG TCGACGATCG AACGCTTCAT CAAGCTGCAT CCCAGCAGCC CGGCGATCGA CTATGCCTAC TACCTGCAGG GCCTGATCAA CTTCAACGAG AACCTCGGCC TGCTCGGCGG GCTGGCACGC CAGGATCTCT CCGAACGCGA CCAGCAGGCC GCGCGCGACG CCTACCAGAG CTTTCGCCAG CTCACGCTGC AGTTCCCCAA TTCCAAGTAC ACGCCGGATG CGCAGCTGCG CATGAACTAC ATCGTCAACA CGCTGGCCAC CTACGAGGTC CACGTGGCGC GCTACTACTA CCGCCGCGGC GCCTACGTGG CCGCGGCCAA CCGCGCCCAG CAGGCCGTGC AGGAATTCCA GCGCGCTCCT GCGACCGAGG AGGCGCTCTA CATCCTGGGC ATCAGCTACG ACAAGCTCGG CCTGACCGAA CTGCGCGACG ATGCCCAGCG TGTGCTGCAG ACCAACTTTC CGGAATCGCG CTACGTGAAG GACGGCTTCG AGACGGCCGA CAAGCCCTGG TGGCAGATCT GGTGA
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Protein sequence | MTAMRMSPAA HWRATLAVVL AAASIGLIGC AGGPKDEFAG KSTDKLYEEA RDEAANGNWE RASKLYEKLE ARTAGTQQAQ QTQIDLAYAY YKTNEKAQAL STIERFIKLH PSSPAIDYAY YLQGLINFNE NLGLLGGLAR QDLSERDQQA ARDAYQSFRQ LTLQFPNSKY TPDAQLRMNY IVNTLATYEV HVARYYYRRG AYVAAANRAQ QAVQEFQRAP ATEEALYILG ISYDKLGLTE LRDDAQRVLQ TNFPESRYVK DGFETADKPW WQIW
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