Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A2002 |
Symbol | |
ID | 4783789 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 2145046 |
End bp | 2145831 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640090572 |
Product | condensin subunit ScpB |
Protein accession | YP_001021195 |
Protein GI | 124267191 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0508753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.414408 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACAC AGGATGCAAA GCGCGTCCTC GAGACGGCGC TCATCTGCGC GCAGCAGCCG CTGCCGCTGC GCGAGTTGCG CACGCTGTTC GATGACCAAC TCGGCCCCGA CACCCTGCGC GTCCTGCTCG ACGAGCTGGC GCGCGACTGG GAGGACCGCG GCGTCGAGCT CGTGGCGGTG GCCAATGGCT GGCGTTTCCA GAGCCGTCCG GAGCTGCGTG AGTACCTCGA TCGCCTGCAC CCCGAGAAGC CGCCGCGCTA CACCCGCGCG ACGCTCGAGA CGCTGGCAAT CATTGCCTAC CGCCAGCCCG TGACGCGCGG CGACATCGAG GACATCCGCG GCGTCACCGT CAACAGCCAG TTGCTCAAGC AGCTCGAGGA CCGCGGCTGG ATCGAGGCGA TCGGCCACCG CGAAACGCCG GGGCGGCCGG CGCTGTTCGC GACGACGCGG CAGTTCCTCG ACGACCTCGG CCTCGCCACG CTCGAGCAGT TGCCCGCCCT CGACGGCGCG CCAGCGGTGA CGATGCTCGT CGACGCCTTG CCGGGCCAGG TATCGCTACT CGATGTCGCC ATCGATGCGG CCTTGCCGGG GGAGGGCGAT CCCGGGCTTC CGCAGCAGGG CCTCGATGCC ATTCCGCCGG AGCCGCTCGA GGCTTCGGAC GAAGCGGCCT CGGACGACGA CGAGGCTGTC GACGCAGCCA TCCCCATGGC TGCATCGGAG GCTCTCTCCT CGACCGCAGA ACTTCCCACG CCGCCGGCCG ACGCCGGCAC GGAACCCCAG ACATGA
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Protein sequence | MNTQDAKRVL ETALICAQQP LPLRELRTLF DDQLGPDTLR VLLDELARDW EDRGVELVAV ANGWRFQSRP ELREYLDRLH PEKPPRYTRA TLETLAIIAY RQPVTRGDIE DIRGVTVNSQ LLKQLEDRGW IEAIGHRETP GRPALFATTR QFLDDLGLAT LEQLPALDGA PAVTMLVDAL PGQVSLLDVA IDAALPGEGD PGLPQQGLDA IPPEPLEASD EAASDDDEAV DAAIPMAASE ALSSTAELPT PPADAGTEPQ T
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