| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1952 |
|---|
| Symbol | |
|---|
| ID | 4784738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 2088678 |
|---|
| End bp | 2089769 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640090522 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001021145 |
|---|
| Protein GI | 124267141 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.126845 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCCC AGTCCGGAAC GAAACCCGTC ACCTCGCAGC ACGCATTCGA CGTTGGCGCA
CTGCAGTCCT ATCTCGAATC CGCGCTCGAC GGCTTCCGCG GTCCGCTCAG CGTCGAGCAA
TTCAAGGGCG GCCAGTCGAA CCCGACCTTC AAGCTGCTCA CCCCGCAGCG CAGCTACGTG
ATGCGCAGCA AGCCGGGGCC GGTCGCGAAG CTGCTGCCGT CGGCACATGC GATCGAACGC
GAGTTCACGG TGATGCGAGC ACTCGCCGGA AGCGAAGTAC CAGTGGCCCG GATGCACCTG
CTGTGCGAGG ACGAATCGGT GATCGGCCGG GCCTTCTACG TGATGGAGTA CGTGGAGGGC
CGCGTGCTGT GGAGCCAGGC ACTGCCCGAC ATGACCACCG TGCAGCGTGG TGAGATCTAC
GACGAAATGA ATCGCGTGAT CGCGGCGCTG CACCGTGTGG ACTACGCCGC TTGCGGTCTG
GCCGGCTACG GCAAGCCCGG CAACTACTTC GAGCGTCAGA TCGGACGCTG GAGCCGCCAG
TACCAGGCCT CTCTGGGTCC CGGCGGACCG GAGCCGATCG ACGCAATGGA GCGCCTGATC
GACTGGCTGC CGGATCACAT CCCGGCCAGC GCACGCGATG AATCCCAGAC CCGCATCGTT
CACGGCGACT ACCGGCTCGA CAACCTGATC TTCCACCCGA GCGAGCCGCG CATCGTCGCG
GTGCTCGACT GGGAACTGTC GACGCTGGGA CACCCTCTGG CCGACTTCAG CTACCACTGC
ATGAGCTGGC ACATCTCGCC CGGCACCTTC CGCGGCATCG GCGGGCTCGA CGTCGCGGCG
CTCGGCATCC CGACCGAAGC CGAGTACATG CAGCGCTATT GCGAACGCAC CGGCCGCGGC
GGCACCGACG CGCTGGTGAC AGACTGGAAC TTCTACCTGG CATACAACCT GTTCCGCATG
GCCGGCATCC TGCAGGGCAT CGCCAAGCGT GTGCTGGACG GCACCGCCGC GAGCGAGCAG
GCCCGACAGG CCGCTGCCGG CGCTCGACCG CTAGCCGAAC TGGGCTGGGC GATCGCACAA
CGGCAGCGCT GA
|
|---|
| Protein sequence | MEAQSGTKPV TSQHAFDVGA LQSYLESALD GFRGPLSVEQ FKGGQSNPTF KLLTPQRSYV
MRSKPGPVAK LLPSAHAIER EFTVMRALAG SEVPVARMHL LCEDESVIGR AFYVMEYVEG
RVLWSQALPD MTTVQRGEIY DEMNRVIAAL HRVDYAACGL AGYGKPGNYF ERQIGRWSRQ
YQASLGPGGP EPIDAMERLI DWLPDHIPAS ARDESQTRIV HGDYRLDNLI FHPSEPRIVA
VLDWELSTLG HPLADFSYHC MSWHISPGTF RGIGGLDVAA LGIPTEAEYM QRYCERTGRG
GTDALVTDWN FYLAYNLFRM AGILQGIAKR VLDGTAASEQ ARQAAAGARP LAELGWAIAQ
RQR
|
|---|
| |