Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1934 |
Symbol | |
ID | 4786695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 2071926 |
End bp | 2072846 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640090504 |
Product | hypothetical protein |
Protein accession | YP_001021127 |
Protein GI | 124267123 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00452472 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGTGCTTCT CTGCCCAGCT CGTAGACGCC TACCGTCAGC ACTGCCGCCG CTGGGGCGCC TTCATCTCCT TGGAGGAGTT CAAGGATTTG TATGGGCCTG CGTTCAGCGA TAGACGCAAG GTCCCCAAGA TGATCGACCA GTTTTTCGCC GATCCTCAGA CCGACGACGA GCGGGCCATC AAGACACTGA TCGACCAGCG CAACGCCGAG CTGGCCACCG AGCACGAGCA GGAGCTGTTC AAGCAGCGCA CGAGGCTGGC CGACGCCGAA CGCAAGCTCG CGGTCAAAGA GACCAAGGCC GCCGCCGAGA GCAAGCGCAT TGCAACGGAC AAGGTCGAGG CGCTGAAGCG CAAGCTCGAT GACTTGCGCC GCACCGAGCC CAAGGATCGC GATGCGCGGA TCTTCCCCGG CATCTACGCG CCGGTGATCG TCAGCGAGGG CGGCAAGCTC GTGGTGAAGC CGATGCGCTA CCAGTGCCGC CCAGCCGGCA AGCCGGCGTT CTACGACATC AAGTACCCGG GCACGTACAA CGCCCGCAGG GACAACCTCG AAGGCTTCTG GAAGGGCCAG TTCGGCCACA CCCACGGGCT CATGATCGTC AAGACCTTCT ACGAGAACGT CGACCGCGAC GGCAAGAACG TGGTGCTGCA GTTCACCCCC GACGACCGGG AGCCGATGCT GGTGGCGTGC CTGTGGTCAC GGTGGACCGG AAAGGACGAA CCGGATCTGC TGAGCTTCGC CGCGATCACC GACGACCCAC CGCCCGAGGT GGCCGCTGCG GGGCACGACC GCTGCATCGT GCAGATCAAG CCCGAGAACG TTGCGGCCTG GCTCAATCCT GACCCGAGGA ATCTGGCGGC CAGCTACGCG ATCCTCGATG ACCGACCGCG GCCCTACTAC GAGCATCGCT TGGCTGCTTG A
|
Protein sequence | MCFSAQLVDA YRQHCRRWGA FISLEEFKDL YGPAFSDRRK VPKMIDQFFA DPQTDDERAI KTLIDQRNAE LATEHEQELF KQRTRLADAE RKLAVKETKA AAESKRIATD KVEALKRKLD DLRRTEPKDR DARIFPGIYA PVIVSEGGKL VVKPMRYQCR PAGKPAFYDI KYPGTYNARR DNLEGFWKGQ FGHTHGLMIV KTFYENVDRD GKNVVLQFTP DDREPMLVAC LWSRWTGKDE PDLLSFAAIT DDPPPEVAAA GHDRCIVQIK PENVAAWLNP DPRNLAASYA ILDDRPRPYY EHRLAA
|
| |