| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1875 |
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| Symbol | |
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| ID | 4786755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 2002014 |
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| End bp | 2004179 |
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| Gene Length | 2166 bp |
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| Protein Length | 721 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640090445 |
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| Product | putative ABC transporter |
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| Protein accession | YP_001021068 |
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| Protein GI | 124267064 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.147039 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTAC CGCCCTCTTC CACCGCCACG ACCCGCCTGC GCGAAGACCT GATCCACCCC
GACCCGCTGC TGGACTGTCT GCTGGAAGTC TGCCGCGTGC ACGGCGTGGC CGCATCGCGC
GCATCGCTGT CGGCGGGCCT GCCGCTGGTC GACGGCCGCC TGACGCTGGC CTTGGCCGAA
CGTGCTGCCG ACCGGGCGGC GATGACCGCG CGTCTGCAGC GCATGGCGCT CGATGCGGTC
GATACGGCCA CGCTCCCCGC CATCGCCGTG CTGCACGACG AGCGCGCCTG CGTGCTCCTT
GGCCGCGATG CCTCCGGCGC CTGGCAGGTG CTGATGCCGG AGACCGGCGC CGGTGCCGTG
ACGCTGGACG CCGACCAGCT GGCCGAGCGC TACAGCGGCG TGATGCTGTT CGTGCGGCCG
CAGTTCCGCT TCGACGAACG TGCGCCCGAG GTGCGCGCCA CCCGCGCCGG CCACTGGTTC
TGGGGCGCCG TGCTGGCGCA GCGGAACGTG TACCGCGACG TGCTGTGGGC GGCACTGCTG
ATCAACCTGT TCGCGATCGC CTTCCCGCTG TTCTCGATGA ACGTCTACGA CCGCGTGGTG
CCCAACCATG CGGAGGAGAC GCTGTGGGCG CTGGCGATCG GGGTGCTGAT CGTCATCAGC
GCCGATCTGT TCATGCGCAC GCTGCGCAGC CATTTCGTCG ACGAGGCCAG CGCCCGCATC
GACGTGCAGA TCTCGGCCAC GCTGATGGAG CGCGTGCTGG GGATGCAGCT CTCTCACAGG
CCGGCGGCAG TCGGCTCGTT CGCGTCCAAT CTGCGCGGCT TCGAGCAGGT GCGCGACTTC
ATCGCCTCGA GCACCGTCAC GGCGCTGATC GACCTGCCGT TCGCCCTGCT GTTCATCGGC
GTGATGTTCT GGCTGTCGCC CTGGCTCGCT GCGCCCGTGG TAGTCGCCTT CGTGCTGGTC
GTGGTGGTCG GCTACATCCT GCAGCACCGG CTGCACGAGC TGTCGCAGGC CACCTGGCAG
GCCGGCGCCC AGCGCAACGC GACGCTGATC GAGAGCCTGA CCGCGATCGA GACCGTCAAG
ACCCAGGGTG CCGAAAGCGT GATCCAGGCC CGCTGGGAGC AGACCAATGC CTACCTGGCC
GGCATCAACA TGCGCATGCG CGGCCTGTCG TCCACCGCGC TGTCGGCCAC GGCCTGGCTG
ACGCAGTTGG TGAGCGTGTC GCTGATCGTC ATCGGCGTCT ACCTGATCGG CGACCGCCAG
CTGACGATGG GTGCGCTGAT CGCCGCCACG ATGCTCAGCG GCCGTGCGCT GGCGCCGGCC
GGGCAGATCG TCGGCCTGCT GCTGCAGTAC CAGGGGGCGG TGACGGCGCT CGAATCGCTG
GAGAAGATCA TGGCCCAGCC CGTCGAGCGG CCGGCCGGCA ATGCCTTCAT CCACCGGCGC
GAACTGCGCG GCGAGATCGA GTTCCGGGAC GTCCATTTCG CCTACCCGGG ACGTTCCGAC
AGTGCGCTCG ACGGCGTGAG TTTCAAGATC GCCGCCGGCG AACGGGTGGC GCTGATCGGC
AAGGTCGGCT CCGGCAAGAG CACGATCGAG AAGCTGATGC TGGGCCTGTA CGCCCCCACC
GCGGGCGCCG TGCTGCTCGA CGGCATCGAC CTGCGCCAGC TCGACCCGGC CGACGTGCGA
CGCAACCTCG GCTACGTGTC GCAGGACGTG ACGCTGTTCT TCGGCAACCT GCGCGAGAAC
ATCGCCTTCG GTCTGCCCTA CGCCGATGAC GAGGCCATCG TCGCGGCGGC CGAGGTGGCC
GGACTCAGCG AGTTCGTCAA CCGCCATCCC CGCGGCTTCG ACATGCCGGT GGGCGAACGC
GGCGAATCGC TGTCGGGCGG CCAGCGCCAG AGCGTCGGAC TGGCCCGCGC AGTGCTGCAC
AACGCGCCGA TCCTGCTGCT CGACGAGCCG ACCAGCGCCA TGGATTTCGC CACCGAAGCT
CACGTCACGT CGCGCCTCGC TTCGATCGCC AGCAACAAGA CGGTGGTGCT GGTCACGCAC
CGCACCTCGC TGCTGCCGAT GGCCACGCGG CTGATCGTCG TCGACCAGGG ACGTGTTGTC
GCCGACGGGC CGCGTGAGCA GATCATGCAG GCGCTTGCCG CCGGTCGCAT CACGAGGGCG
GCCTAG
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| Protein sequence | MTLPPSSTAT TRLREDLIHP DPLLDCLLEV CRVHGVAASR ASLSAGLPLV DGRLTLALAE
RAADRAAMTA RLQRMALDAV DTATLPAIAV LHDERACVLL GRDASGAWQV LMPETGAGAV
TLDADQLAER YSGVMLFVRP QFRFDERAPE VRATRAGHWF WGAVLAQRNV YRDVLWAALL
INLFAIAFPL FSMNVYDRVV PNHAEETLWA LAIGVLIVIS ADLFMRTLRS HFVDEASARI
DVQISATLME RVLGMQLSHR PAAVGSFASN LRGFEQVRDF IASSTVTALI DLPFALLFIG
VMFWLSPWLA APVVVAFVLV VVVGYILQHR LHELSQATWQ AGAQRNATLI ESLTAIETVK
TQGAESVIQA RWEQTNAYLA GINMRMRGLS STALSATAWL TQLVSVSLIV IGVYLIGDRQ
LTMGALIAAT MLSGRALAPA GQIVGLLLQY QGAVTALESL EKIMAQPVER PAGNAFIHRR
ELRGEIEFRD VHFAYPGRSD SALDGVSFKI AAGERVALIG KVGSGKSTIE KLMLGLYAPT
AGAVLLDGID LRQLDPADVR RNLGYVSQDV TLFFGNLREN IAFGLPYADD EAIVAAAEVA
GLSEFVNRHP RGFDMPVGER GESLSGGQRQ SVGLARAVLH NAPILLLDEP TSAMDFATEA
HVTSRLASIA SNKTVVLVTH RTSLLPMATR LIVVDQGRVV ADGPREQIMQ ALAAGRITRA
A
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