Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1758 |
Symbol | |
ID | 4784216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1887205 |
End bp | 1887861 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640090328 |
Product | hypothetical protein |
Protein accession | YP_001020952 |
Protein GI | 124266948 |
COG category | [S] Function unknown |
COG ID | [COG5373] Predicted membrane protein |
TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.322377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACCTGA GCTTCGAACG TCAGCCGCCG TCGCGGCGCT TCGTCGGCTT CGTCGTCGTG GCGGTGCTGC ACGTCTTCAT CTTCTATGCG CTGGTGTCGG GTCTGGCCCG CAGCGTGGTC GAGGTGGTCC GCAAGCCGCT CGAGGCGAAG ATCATCGCGG AGCTCCCTCC GCCGCCGCCG CCTCCGCCGC CCCCGCCGCC GCCCAAGGAG ATCCGGAAGC CTGCGCCACC ACCGAAGGTG AAGGCGCCGC CGCCGCCCTA CGTGCCGCCG CCGGAGATCA CCCCGCCGCC GGCCCCCGCG CCGCCGATCA CCGTGGCGCC CGAGCCGCCG AAGGTGGAAT ACAAGATCGA GCCGCCCCCG CCGCCCGCCC CGCCGCCGGC GCCGCCGGCC CCGCCTGCTC CCAGCCGCAG CGACATCACG GTGGTCTGCC CGACGCAGGT CAAGCCGGAA CTGCCGCGCC GCGCCCTGCA GGAGGGCACT TCCGGCGTGG TACGGGCGCA GGCGCGCATC AGCGGCGGCG TGGTCAAGGA GGTCACCATC CTGTCGGGGC CACGCGTCTT CCACGCCGCG GTGCGCAGCG CGATGCTGCA GTACAAGTGC GTGAGCGGTG CCGACGACGT GATCGCCGTA CAGGAGTTCG AGTTCAAGAT CGAGTGA
|
Protein sequence | MDLSFERQPP SRRFVGFVVV AVLHVFIFYA LVSGLARSVV EVVRKPLEAK IIAELPPPPP PPPPPPPPKE IRKPAPPPKV KAPPPPYVPP PEITPPPAPA PPITVAPEPP KVEYKIEPPP PPAPPPAPPA PPAPSRSDIT VVCPTQVKPE LPRRALQEGT SGVVRAQARI SGGVVKEVTI LSGPRVFHAA VRSAMLQYKC VSGADDVIAV QEFEFKIE
|
| |