Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1672 |
Symbol | |
ID | 4785753 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1795144 |
End bp | 1798641 |
Gene Length | 3498 bp |
Protein Length | 1165 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640090241 |
Product | superfamily II helicase-like protein |
Protein accession | YP_001020869 |
Protein GI | 124266865 |
COG category | [R] General function prediction only |
COG ID | [COG1204] Superfamily II helicase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.406776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGCGA CGCTCGACGA ACTCCGGATA AACATCGAAG CAGCCGTGGT GCCCGGCTAC CGTGCGCGCC TGCTCGCCCG CGGCCAGGCG CGCGGCATGA TCTGGCGCGA AGGCGTTCTG CCAGAGGAAT CTCCGAACTT CGGCGCGGAG TTGTCGGACG AGCTGCTGTC CTACGGTTAC TCGCTCCTGC TGCACGGGCT TCGCTACACC GACCTGGGTG GCGATGCCGC AACGGCGCGC AAGGCCTTTG AGATTGCCGC CGAGGCACTC GAAGCTGTCG TCGCACGCGG ACCGGCCGGC GCTGAACGAG GCTTTCATCG GCTCGTCGCT GCCGCCGCCT ACCACTTGGG CCGCTTCTCG GCTCGGGCCT ACTCGCTCCT CTACAAAGGA CTCGGCGAGG CGAACCTGTC GACGATGGAG ACAGGGCTGG CGAAACTCAT GCTCCGCGAC TTGGACGGCC TTGCCCGAGA TCTCGCCGAT TGGTTCGCTG CGGACCGAGG CAGCGACGAT GCACTTGTTG CTGGCCTAAG CCAACGCGAC GCCAAGGTGA CCAGCGCCGG TGCTGACGAT GAAGAGACTT CGGACGACCG AGTTGACGCC GTGCTCATTG CAGTTGAAGA CAACTTCATG GCTGCGCTCG CGGTTGCAAT GCTCGGGCTG GAGCGCGGCG ATGAGACCTT GCTGCAGTCG GCACGCGAAC GAATACAACG CGGCCTCGAC GTCGCCGCAG ACCTCGACCT CGTCGCCGCT TGGTGGTGCC ACCGCCTGGC GATCCACCTC CTGGGCGGCC TATGGGAGAC AAGCTTCCAT CAGGTGCTAC CGCTCGGTGG ACCGCCCGGG GCCGACGTCG GCGACTGGGT GCGACTGCGA AAGATCTTCA TCGCTTCGCT CTACCGCAGA GGCCGGTCCG AGATCGAGCT GTGGCCATCC CAATTGCAGG CAGCACGTCG AGTCCTCGAT GCCGAGGTGA ACCTCGTGCT GTCGCTCCCG ACGAGCGCAG GCAAAACGCG CATCGCGGAG CTGTGCATCC TGGCCAGCCT GGCGCGAGGC CGGCGCGTCG TCTTCGTCAC GCCGTTGCGC GCGCTGTCAG CGCAGACTGA GGTCGGGCTG CGGCGCACCT TCGCGCCAGT AGGCAAGTCT GTCTCGAGCC TGTACGGCAG CATCGGCGCC AGTGGCGCCG ACATCGACGC GCTGCGTTCG ACAGACATCG TTGTCGCCAC GCCCGAAAAG CTCGACTTCG CGCTGCGTAG TGATCCGACG TTGCTGGATG ACGTCGGCCT TATCGTGCTC GACGAAGGTC ACATGATCGG CCTGGGCGAA CGTGAGGTCC GCTACGAGGC CCAGATCCAG CGCCTGCTGC GTCGGCCCGA TGCTGCACAG CGGCGCATCG TGTGCCTGTC TGCGATTCTT CCCGATGGGG ACCAGTTGGA GGACTTCGCG GGCTGGCTGA CACGTGATCG CCCCGACGGG CTGATCAAGG ACGATTGGCG TCCGACCCGG CTGCGCTTCG GCGAGGTGGA TTGGAAGGGT CAGCACGCAC AGCTCAACGT CAACGTCGGC GACGAGAAGC CTTTCATCCC GAGATTCGTG GTCGCGAAGA AGCCAACGCG TGGCCGCGCC AGGAAGCTGT TCCCGGCCGA TCAGGCGCAG CTGTGCATCG CGACGGCCTG GCGCCTGGTG GAAGAGGGCC AGACCGTCCT TGTCTTCTGC CCGATGCGCC GCTCGGTGCT GCCGTTGGCA GCGACCATTA TCGAGATGCA CAAGCGCGGC CACATCGACT CGGTACTGGA GCAAGCGCCG TCCGCGCTGA CGAGGGCGCT AGCTGTCGGT ACCGAGTGGT TCGGACCCGA TCATGACATC CTCGCCTGCC TGAAGCTCGG GGTTGCCGTG CACCACGGCG CCCTACCCAC GCCGTACCGC AAGGAGGTCG AGCGCTTGCT GCGCGAGGGG GTGCTGCGCG TGACGGTCTC CTCGCCGACG CTGGCCCAGG GACTCAACCT TGCCGCGACC TCCCTGGTCT TCCGCGGCGT CAGACGCGGC CGCGACCTCC TCGACGTAGC GGAGTTCCGC AATGTCGTCG GCCGGGCTGG GCGCGCCTAC ATCGACGTCG AAGGCCTCGT GGTGTATCCG ATGTTCGACA ACCATCGGCA GCGGCGCAAC GACTGGCAGG ACTTGGTTGC GAACCACAGC GGCCGGGAGA TGGAGAGCGG CCTGTTGCGT CTGATCTTTA CGTTACTCAG TCGGATGGCC AACAAGCTGG GCACCCGCGA CGTCGGAGCC CTTCTCGAGT ACGTCGCCGG GCAGGCTGCC TGGGAATTCC CGGTGCTCCC GTCCGAGACG ACCGAGGAAG CAACCGAAGC GCGGCACCGG TGGGACCAGC ATCTGGCAAG CCTGGACACC GCGATCTTCA GCCTGCTGGG CGACACCATC GTGCTTGATG CCGAAGTCGA AACCAAGCTG GATGAGATCC TCGTAGCCTC TCTGTTCCAG CGGCGCCTCG CCCGCCACAA AGAGGGGATA CGCCAAGCGC TGCCAAAGGG ACTGCACGCT CGCGCGCGAT ACGTCTGGCG CAACAGTACG CCCACGCAAC GGCGGGGATA CTTTCTAGCG GGTGTGGGGC TGGCCGCGGG CAAGGCCCTC GACAAGCACG CGCCAGAACT CGAGCAACTG CTGCTGACGG CGAACGTCAG CATCGACCTC GGCCAGCACA ATGAGGCGGT CGAGGCCATC GTGGCGTTTG CCGAGATCGC CTTCGACATC GCGCCGTTCA AGCCGGACAA GCTGATCGAC GGGTGGGAAT CTTTGCTCAG GCGATGGCTT CTCGGTCAGC CCGTGGCCGA CGCATTGTCC GAGGACAGCG ACGACGAGAT TCAGTTCATC GAGCAGGCGT TCGTCTACAA CCTTCCCTGG GCTATGGAGG CGGTACGGGT CCGTGCTGAG GCACACGAGG ACCTTTTTTC GGACGAGATC AAGCTGTCGG ATTACCCGCG GGCGCACGCG GTCGCAGCAC TGGAGACCGG CACGCTGTCG ATCGCCGCCG CGACGCTGAT CCAGGCGGGT TTCGGTTCGC GCCTCGGGGC AATTCGCGCC GTCGCGGAGA CGGGCGCGAC CTTTGACTCG ATGAGCGGTC TCATGGGCTG GCTCGCATCA GACGAGGTAG GGGCCTTGTC CGCGGCGCCG AACTGGCCAA CGCCGGAATC GAACCCACTG TGGGTTGACT TCAACGGACC GGGCGGCGCG CAGGCGACCC AGCCTTGGGC TGCTACCGAG TACACGAGCG GGATCACGTG GCGCGGTGCA CCAATGCCGC CCGGGACGGC TCTGCGGCTG GGCGGCGGCC CCGGGAAGGA GCGCAGCGTC TTCACGGCTG ACTTCCGGGA AGTCGGAGCG ATCGGCTGGA CGCCAAGTGC GCAGGGCCTG ATCGTCGCCG AAGCTACGGG CGACACCGGC AAGTTCACGT TGGAGCACAT CGGCCCTGGC AAGGTGAACC GCGACTGA
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Protein sequence | MAATLDELRI NIEAAVVPGY RARLLARGQA RGMIWREGVL PEESPNFGAE LSDELLSYGY SLLLHGLRYT DLGGDAATAR KAFEIAAEAL EAVVARGPAG AERGFHRLVA AAAYHLGRFS ARAYSLLYKG LGEANLSTME TGLAKLMLRD LDGLARDLAD WFAADRGSDD ALVAGLSQRD AKVTSAGADD EETSDDRVDA VLIAVEDNFM AALAVAMLGL ERGDETLLQS ARERIQRGLD VAADLDLVAA WWCHRLAIHL LGGLWETSFH QVLPLGGPPG ADVGDWVRLR KIFIASLYRR GRSEIELWPS QLQAARRVLD AEVNLVLSLP TSAGKTRIAE LCILASLARG RRVVFVTPLR ALSAQTEVGL RRTFAPVGKS VSSLYGSIGA SGADIDALRS TDIVVATPEK LDFALRSDPT LLDDVGLIVL DEGHMIGLGE REVRYEAQIQ RLLRRPDAAQ RRIVCLSAIL PDGDQLEDFA GWLTRDRPDG LIKDDWRPTR LRFGEVDWKG QHAQLNVNVG DEKPFIPRFV VAKKPTRGRA RKLFPADQAQ LCIATAWRLV EEGQTVLVFC PMRRSVLPLA ATIIEMHKRG HIDSVLEQAP SALTRALAVG TEWFGPDHDI LACLKLGVAV HHGALPTPYR KEVERLLREG VLRVTVSSPT LAQGLNLAAT SLVFRGVRRG RDLLDVAEFR NVVGRAGRAY IDVEGLVVYP MFDNHRQRRN DWQDLVANHS GREMESGLLR LIFTLLSRMA NKLGTRDVGA LLEYVAGQAA WEFPVLPSET TEEATEARHR WDQHLASLDT AIFSLLGDTI VLDAEVETKL DEILVASLFQ RRLARHKEGI RQALPKGLHA RARYVWRNST PTQRRGYFLA GVGLAAGKAL DKHAPELEQL LLTANVSIDL GQHNEAVEAI VAFAEIAFDI APFKPDKLID GWESLLRRWL LGQPVADALS EDSDDEIQFI EQAFVYNLPW AMEAVRVRAE AHEDLFSDEI KLSDYPRAHA VAALETGTLS IAAATLIQAG FGSRLGAIRA VAETGATFDS MSGLMGWLAS DEVGALSAAP NWPTPESNPL WVDFNGPGGA QATQPWAATE YTSGITWRGA PMPPGTALRL GGGPGKERSV FTADFREVGA IGWTPSAQGL IVAEATGDTG KFTLEHIGPG KVNRD
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