| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1621 |
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| Symbol | |
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| ID | 4787245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1748351 |
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| End bp | 1749607 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640090189 |
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| Product | tetracycline-efflux transporter |
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| Protein accession | YP_001020818 |
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| Protein GI | 124266814 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.651661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCCC CGCCGCGGGC CCGCGTAGCG GCCATGCCCT TCATCCTGAT CACGGTGCTG
ATCGACATGG TGTCGATCGG CCTGATCATC CCGGTGCTGC CGCTGCTGGT CGGCAGCTTC
ACCGGCTCGC CCTCCGACAC CGCGTTCTGG TTCGGCGTGG TCACCTTCGC CTTTGCGATC
GCCAACTTCT TCGGCTCGCC GATCCTCGGC GCACTGTCCG ACCGCTACGG GCGCCGGCCG
GTGCTGCTGA TCGGCTTCTG CGGCCTCGCG CTCAACTTCT TCTTCACGGC GCTGTCGACG
GCGCTGTGGA TGCTGGTGGC GGTGCGCCTC GTCGGCGGGG CGATGCAGGC GAATGCCGCG
GTCGCCAACG CCTACGTCGC CGACATCACG CCGCCCGAAC AGCGGGCACG GCGCTTCGGA
CTGCTGGGCG CGATGTTCGG CCTGGGCTTC ATCCTCGGGC CGGTGCTGGG CGGGCTGCTC
GGCGCGATCG ACCTGCACCT GCCGTTCTAC GTGGCAGGCT CACTGGCGCT GGTGAACTGC
CTGTACGGCT GGCTGGTGCT GCCCGAGTCG CTGCCTGCCG AGCGCCGGCG TGCGATCGAC
TGGAAGCGCG CCAACCCGTT CAGCGCGCTC CGGGACCTGG CCGGCCTGAA GGGCGTGGGC
TCGCTGGTGG CGGTGCTGGC GCTGTCGGGG CTGGTGCAGT TCACACTGCA CATCACCTGG
GTGCTGTACA CCACCTACAA GTTCGGCTGG GGACCGCTGG AGAACGGCTG GTCGCTGTTC
GCGGTCGGGC TGATGTCGGC CCTGGTGCAG GGCATGCTGC TGGGGCGGCT GCTCAGGCGC
TTCAGCGCGC AGCGGCTGGC GGTGACCGGC CTGGTGTCGT CGAGCCTGGC CTATGTCTGC
TGGGGCCTCG CGACCGAGGG CTGGATGATG TACGTGGTGA TCGCGTGCAA CGTGCTCGGG
TTCGGCGTCA CGGCCTGCCT GCAGAGCATC GTGTCGAACG CTGCCGACCC GCGCACCCAG
GGGCAGACGA TGGGCGCGGT ATCGTCATTG AACAGCCTGA TGGCCGTGGT GGCGCCGGTG
ATCGGCGCAC CGCTGCTCGG CCTGGTGTCG CACCTGCCGC AGGGCGACTG GCGCATCGGC
GCCCCCTACT ACTTCTGCGC CGCGCTGCAG GCCACGGCCA TGCTGCTGGC GCTGCGGCAT
TTCCGTGCGC AGCGCGGCCA GCGCGCCGCG GCTGTCGCGA CCGAATCTCC CGTCTGA
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| Protein sequence | MTSPPRARVA AMPFILITVL IDMVSIGLII PVLPLLVGSF TGSPSDTAFW FGVVTFAFAI
ANFFGSPILG ALSDRYGRRP VLLIGFCGLA LNFFFTALST ALWMLVAVRL VGGAMQANAA
VANAYVADIT PPEQRARRFG LLGAMFGLGF ILGPVLGGLL GAIDLHLPFY VAGSLALVNC
LYGWLVLPES LPAERRRAID WKRANPFSAL RDLAGLKGVG SLVAVLALSG LVQFTLHITW
VLYTTYKFGW GPLENGWSLF AVGLMSALVQ GMLLGRLLRR FSAQRLAVTG LVSSSLAYVC
WGLATEGWMM YVVIACNVLG FGVTACLQSI VSNAADPRTQ GQTMGAVSSL NSLMAVVAPV
IGAPLLGLVS HLPQGDWRIG APYYFCAALQ ATAMLLALRH FRAQRGQRAA AVATESPV
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