| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1387 |
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| Symbol | |
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| ID | 4783980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1496461 |
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| End bp | 1498143 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640089953 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001020584 |
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| Protein GI | 124266580 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.63064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.987031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA ACCGCCGTTC GAAGAACATC ACCGAAGGCG TGGCCCGCGC ACCCAACCGC
TCGATGTACT ACGCGATGGG CTACCAGGAG GCCGACTTCA AGAAGCCGAT GATCGGCGTG
GCGAACGGCC ACTCGACCAT CACGCCCTGC AACTCGGGCC TGCAGAAGCT GGCCGACGCC
GCGGTCGAGG GCATCGAGGC GGCCGGCGGC AATGCACAGA TCTTCGGCAC CCCCACCATC
AGCGACGGCA TGGCGATGGG CACCGAGGGC ATGAAGTACT CGCTGGTCTC GCGCGAGGTC
ATCGCCGACT GCGTGGAAAC CTGCGTCGGC GGCCAGTGGA TGGACGGCGT GCTGGTGGTC
GGCGGCTGCG ACAAGAACAT GCCGGGCGGC ATGATGGGCA TGCTGCGCGC CAACGTGCCC
GCGATCTACG TCTACGGCGG CACCATCCTG CCGGGAAAGT ACAAGGGCCA GGATCTCAAC
ATCGTCAGCG TGTTCGAGGC CGTCGGCCAG TTCACCGCGG GCAACATGAG CGAGGAAGAC
TTCTGCCAGA TCGAGCGACG CGCGATCCCG GGCAGTGGCT CCTGCGGGGG CATGTACACC
GCCAACACCA TGAGTTCGGC CTTCGAGGCC CTGGGCATGA GCCTGCCGTT CGCCTCCACG
ATGGCCAATG TCGAGGACCC GATCGTCGCG CACACCAAGG AAGCGGCGCG CGTGCTGGTC
GAGGCAGTGA AGGCCGACCT CAAGCCGCGT GACATCGTCA CACGCAAGAG CATCGAGAAC
GCGGTCGCGG TGATCATGGC CACCGGCGGC TCGACCAATG CGGTGCTGCA CTTCCTGGCC
ATCGCGCACG CCGCCGGCGT CGAGTGGACG ATCGACGACT TCGAGCGCGT GCGCCGCAAG
GTGCCGGTGC TGTGCGACCT CAAACCCAGC GGCAGGTACC TGGCGATCGA CCTGCACCGC
GCCGGCGGCA TCCCGCAGGT GATGAAGACG CTGCTCGCCG CCGGGCTGAT CCACGGCGAC
TGCATCACCA TCACCGGAAG GACCGTGGCC GAGAACCTGG CCGACATCCC CGATGCGCCG
CGCGCCGACC AGGACGTGAT CCGCCCGATC ACGAAGCCGA TGTACGAGCA AGGCCACCTG
GCCATCCTGA AGGGCAACCT GTCGCCTGAG GGCGCCGTGG CCAAGATCAC CGGCCTGAAG
AATCCCAGCA TCACTGGCCC GGCGCGCGTG TTCGACGACG AGCAGTCGGC GCTGGCCGCC
ATCATGGCCA AGCAGATCCA GGCCGGCGAC GTGATGGTGC TGCGCTACCT GGGCCCGATG
GGGGGCCCGG GCATGCCCGA GATGCTGGCG CCGACCGGTG CGCTGATCGG CCAAGGGCTG
GGCGAATCGG TGGGGCTCAT CACCGACGGC CGCTTCTCCG GCGGCACCTG GGGCATGGTG
GTCGGCCACG TGGCACCTGA GGCCGCGGCC GGCGGCACGA TCGCGCTGGT GCAGGAAGGC
GACTCGATCA CCATCGATGC GCACACGCTG GTGCTCAACC TCAACGTGAG CGAGGCCGAG
ATCGCAAAGC GTCGCGCCGC CTGGAAGGCA CCGGCGCCGC GCTACACACG CGGCGTGCTG
GCCAAGTTCG CGAAGAACGC GTCAAGCGCC AGCAGCGGCG CGGTATTGGA CCGCTTCGAG
TAG
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| Protein sequence | MSINRRSKNI TEGVARAPNR SMYYAMGYQE ADFKKPMIGV ANGHSTITPC NSGLQKLADA
AVEGIEAAGG NAQIFGTPTI SDGMAMGTEG MKYSLVSREV IADCVETCVG GQWMDGVLVV
GGCDKNMPGG MMGMLRANVP AIYVYGGTIL PGKYKGQDLN IVSVFEAVGQ FTAGNMSEED
FCQIERRAIP GSGSCGGMYT ANTMSSAFEA LGMSLPFAST MANVEDPIVA HTKEAARVLV
EAVKADLKPR DIVTRKSIEN AVAVIMATGG STNAVLHFLA IAHAAGVEWT IDDFERVRRK
VPVLCDLKPS GRYLAIDLHR AGGIPQVMKT LLAAGLIHGD CITITGRTVA ENLADIPDAP
RADQDVIRPI TKPMYEQGHL AILKGNLSPE GAVAKITGLK NPSITGPARV FDDEQSALAA
IMAKQIQAGD VMVLRYLGPM GGPGMPEMLA PTGALIGQGL GESVGLITDG RFSGGTWGMV
VGHVAPEAAA GGTIALVQEG DSITIDAHTL VLNLNVSEAE IAKRRAAWKA PAPRYTRGVL
AKFAKNASSA SSGAVLDRFE
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