| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1289 |
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| Symbol | |
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| ID | 4785011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1391766 |
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| End bp | 1392902 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640089855 |
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| Product | putative transport/efflux transmembrane protein |
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| Protein accession | YP_001020486 |
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| Protein GI | 124266482 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.173538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC CGTTCTCTCG CCGCGTCCGC CTCGCCGTGA TGCCGCTGTG TGCCCTGTTC
CTGCTGGCCT GTTCGAGGCA CGAGCCGGCG CCCGAGCCGG TGCGAGCCGT CCGCACGCTC
ACCGCTGCGG GCGACGTGGC CGGCGGTCGC TACGAGTTCG CCGCCGAGGT GAAGGCGCGC
ATCGAGTCGC GGCTCGGCTT TCGTGTCGGT GGCAAGATCC TGCGGCGCGA TGTCGATCTG
GGCGACAGCG TCAAGGCCGG CCAGGTGCTC GCTCGGCTCG ATCCCCGCGA TCTGCGGCTC
GGCGAAGACA GTGCGCGGGC GGCCCTGTCG TCGGCCCAGG CCAGCCATGA CCTCGCCGCA
GCCGACCACC GGCGCTACCA GGAACTGCTG GCCCAGGGCT TCATCAGTGC AGCCGAGCTC
GAGCGTCGCG ACGCCACGCT GAAGGCGGCG CGCGCCGCGC TCGACCAGGC CCGTGCCCAG
TTGGCCGTGC AGGGCAACCA GGCCGACTAT GCGGTGCTGC GGGCCGATGC GGCGGGCGTC
ATCACGGCGG TGGAGGCCGA GCCCGGCCAG GTGATGGCGG CTGGGGCGGC CGTGCTGCGA
CTGGCCCAGG ACGGGCCACG CGACGCGGTG TTCTCGATCC CCGAGGACAA GCTGGCGCTG
GTGCGGGCGC TGGTAGGCAA GCCCGGCGCG GTGAAGGTTC AGCTCTGGGG TTCGTCGGAG
TTGCTGCCGG CGACCGTGCG CGAGATCGCC GCGGCCACCG ATGCCGCCAC GCGCACCTTC
TTGGTCAAGG CGGACGTGGG GCGTGCCGAG GTCAAGCTCG GACAGACGGC GGCGGTGATG
ATCGAGACGC CTCGGATCGC CGGCGTCATC AAGCTGCCGC TCAGCGCGCT GGTGGAATTG
CAGGGCAAGA CCTCGGTATG GCTGCTCGAT GCGCAGAGCA TGACGGTGCG GGCCCAGCCG
GTGCAGGCCA GCGGCGCCGA GGGCAATGCG GTCATCGTGA CGGCCGGCCT GGTGCCGGGC
CAGGAGGTGG TGACTGCCGG CGTCCACCTG CTGACTCCGG GCCAGAAGGT CAAGCGCTAC
GCCGAGCCGG GCGCGGCAGC CGCCGCCGCG TCGGCCGTGA CCGCGGTGAC TCACTGA
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| Protein sequence | MRLPFSRRVR LAVMPLCALF LLACSRHEPA PEPVRAVRTL TAAGDVAGGR YEFAAEVKAR
IESRLGFRVG GKILRRDVDL GDSVKAGQVL ARLDPRDLRL GEDSARAALS SAQASHDLAA
ADHRRYQELL AQGFISAAEL ERRDATLKAA RAALDQARAQ LAVQGNQADY AVLRADAAGV
ITAVEAEPGQ VMAAGAAVLR LAQDGPRDAV FSIPEDKLAL VRALVGKPGA VKVQLWGSSE
LLPATVREIA AATDAATRTF LVKADVGRAE VKLGQTAAVM IETPRIAGVI KLPLSALVEL
QGKTSVWLLD AQSMTVRAQP VQASGAEGNA VIVTAGLVPG QEVVTAGVHL LTPGQKVKRY
AEPGAAAAAA SAVTAVTH
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