| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1287 |
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| Symbol | |
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| ID | 4785009 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1389797 |
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| End bp | 1390660 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640089853 |
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| Product | farnesyl-diphosphate farnesyltransferase |
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| Protein accession | YP_001020484 |
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| Protein GI | 124266480 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03465] squalene synthase HpnD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.200444 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0949052 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCCC AACAGTACGT GCAGGACAAG GCCGCTGCGA GCGGGTCGAG CTTCTACTAC
GCCTTCCTGT TCCTGCCACC GCCGCGCCGC GCCGCCATCA CCGCGTTCTA CGCGTTCTGC
CGCGAGGTCG ACGATGTCGT CGACGAAGTC TCCGACCCCG GCGTCGCGGC CACCAAGCTG
GCCTGGTGGC GCAAGGAGGT GGCCGAGGCC TTCGCCGGTC AGGCGCACCA CCCGGTCCTG
CAGGCCCTGA TGCCGCACGT GGCCGACTAC GGCATCCGTG CCGAGCACCT GAGCGCCGTG
ATCGACGGCT GCGAGATGGA CCTCACCCAG ACGCGCTACC TCGACGACGT GACGCTGCGA
CGCTACTGCC ACCTGGTGGC CGGCGTGGTC GGCGAGGTCG CTGCCAGCAT CTTCGGCTGC
GAGCCCGGGC GCCCGCTGAG CGAGGGCACG CGACGCTATG CCCACACCCT GGGCCGCGCC
TTCCAGCTCA CCAACATCAT CCGCGACGTC GGCGACGATG CGCGCCGCGG CCGCATCTAC
CTGCCGGTGA GCGAGTTGCA GCGCTTCGAC GTGAAGGCGC ACGAGCTGCT CAAGCGCGAG
GCGCCCTGGG GCTACAGCGA GCGCTTCACC TCGCTGATGA AGTTCCAGGC CGAGCGCGCG
CACCGGTCCT ACGACGAGGC GTTCGCGGCG CTGCCCGCCG ACGAGCGCCG TGCACAGCGG
CCAGGCCTGA TGATGGCGGA GATCTACCGC ACGCTGCTGC GCGAGATCGA GGCCACCGGC
TTCCAGGTGC TGCACCAGCG CACCGCGCTG ACCCCGCTGC GCAAGCTGTG GCTGGCGTGG
AAAACCAACT GGCGTGAAAG GTGA
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| Protein sequence | MTPQQYVQDK AAASGSSFYY AFLFLPPPRR AAITAFYAFC REVDDVVDEV SDPGVAATKL
AWWRKEVAEA FAGQAHHPVL QALMPHVADY GIRAEHLSAV IDGCEMDLTQ TRYLDDVTLR
RYCHLVAGVV GEVAASIFGC EPGRPLSEGT RRYAHTLGRA FQLTNIIRDV GDDARRGRIY
LPVSELQRFD VKAHELLKRE APWGYSERFT SLMKFQAERA HRSYDEAFAA LPADERRAQR
PGLMMAEIYR TLLREIEATG FQVLHQRTAL TPLRKLWLAW KTNWRER
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