| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1286 |
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| Symbol | |
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| ID | 4785008 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1388312 |
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| End bp | 1389658 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 640089852 |
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| Product | putative squalene/phytoene dehydrogenase |
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| Protein accession | YP_001020483 |
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| Protein GI | 124266479 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3349] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.109355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGG CGCTGCGGGT TGCGATCGTC GGGGGCGGAT GGGCCGGGCT GGCCGCAGCG
GTCGAGGCGA GCGCGCTCGG CCACCAGGTC ACGCTGGCCG AGATGGCGCC GTCGCTGGGC
GGTCGCGCGC GGCGCCTGCC CGCGTCGGTC GACGGCCTGG CGCTCGACAA CGGCCAGCAC
ATCCTGATCG GCGCATACAG CGCGACGCTG TCGCTGCTGC GGACGGTCGG GGTCGATGAG
CGCACGGTCT TGCAGCGCAG ACCCCTCACC CTGATCGATG CGCAAGGACA TGGCCTGTCC
CTGCCGCGCG GGCCGGCGCT GCCCGGCTTC GTGCGCGGCG TGCTGTCTGC CCGGGGCTGG
TCGCTGCGCG AGCGGATGGC GCTGCTGTGC ACGACCGGCG GATGGCTGCT GCGCGGCTTC
CGTTGCGACG AACGCCTGAC GGTCGCGGAC CTCACGGCCT CGTTGCCCGC CACGCTGCGC
CGAGCCCTGA TCGAACCGCT GTGCGTCGCC GCGCTCAACA CGCCGGCGCA GCAGGCGAGC
GCGCAGGTGT TCCTGCGCGT GCTGCGGGAC GCACTGTTCG CCGGCCCCGG CGCCTCGGAC
CTGCTGCTGC CGCGCGTGGA CCTCGGCGCG CTGTGGCCCG ACGCCGCCGC AACGTGGCTG
CGCACCCGCG ACGCGGTGCT GCACACCGGA CGGCGCGTGA ACGCGATCGC CCCCGACACC
GGCGGCTGGC AGGTCGATGG CGAGCGATTC GACCGCGTGG TGCTGGCCTG CAGCGCCGTC
GAGGCCGCCC GCCTCGCCGC GCCGCATGCG CCGGCCTGGG CCGAGCTGGC CGCCGCGCTG
CGCTACGAAC CGATCGTCAC CGTGCTGCTG CACGCATCCG GAGCCCGGCT CCCGGCGCCG
ATGCTCGCCC TGGACGCGCG CGACGCCGTG TCGCCGGCGC AATACGTGTT CGATCTCGGC
CAGCTGCGTG ACCCGGCACG CGAACCGGGC GCAACCGGCA CGCTGGCCTT CGTCATCAGC
GGCGCGGCCG ACGCCGTCGT GCGCGGGCTC GACGCCACGG CCGAGGCGGT GCGCCTGCAG
GCCACAGCGC AGCTCGGCCG CTGCCTGCCG AGCGAGCCCC GGCTGCTGCG GGTGCTCAGC
GAGAAGCGCG CCACCTTCCT CTGCACGCCC GGTCTGCGGC GCCCGGGCGG CAGCATCGCG
CCGGGATTGC TCGCCGCGGG TGATTACATC GATGGGCCCT ACCCCGCCAC GCTCGAGGGC
GCAATGCGCG CCGGCCAGGC CGCAGCACAG GCACTCCCGC CAACGAAGCT TCCGCACGAG
CCACCAGCCT CGCGCAGCGG GCCCTAG
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| Protein sequence | MTSALRVAIV GGGWAGLAAA VEASALGHQV TLAEMAPSLG GRARRLPASV DGLALDNGQH
ILIGAYSATL SLLRTVGVDE RTVLQRRPLT LIDAQGHGLS LPRGPALPGF VRGVLSARGW
SLRERMALLC TTGGWLLRGF RCDERLTVAD LTASLPATLR RALIEPLCVA ALNTPAQQAS
AQVFLRVLRD ALFAGPGASD LLLPRVDLGA LWPDAAATWL RTRDAVLHTG RRVNAIAPDT
GGWQVDGERF DRVVLACSAV EAARLAAPHA PAWAELAAAL RYEPIVTVLL HASGARLPAP
MLALDARDAV SPAQYVFDLG QLRDPAREPG ATGTLAFVIS GAADAVVRGL DATAEAVRLQ
ATAQLGRCLP SEPRLLRVLS EKRATFLCTP GLRRPGGSIA PGLLAAGDYI DGPYPATLEG
AMRAGQAAAQ ALPPTKLPHE PPASRSGP
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