Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1284 |
Symbol | |
ID | 4785006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1382311 |
End bp | 1385058 |
Gene Length | 2748 bp |
Protein Length | 915 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640089850 |
Product | DNA helicase/exodeoxyribonuclease V, subunit B |
Protein accession | YP_001020481 |
Protein GI | 124266477 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2887] RecB family exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.155997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCAGTT CGCACGAGCT TCCAGGGCAC AATGATTTTG ACACAAGGCC CCCTGGCGCG CCGCGCGGCG CCGGCCCTGC ACGCTATGGG GACGATAGAA GGATCCCGCC CCTGAATCCG ACACCGGACC CTGCCGCCAA GGACATGCCA CCCGAGGCCG ACCTGGCGGT CGCCGCATGC TGGACGCGCC TAGTGCGCGA GATCGCGGCG TTTTCGCGCC GCGAGGCCCT TGCATCGCGG GATGTCGTCG TGCTGCTGCC CTTTGCTCAG CATCTTTCGT TGGCGCGGGC CGCCTGGCTG GCGCTCGACC ACGCGCCCTG GATACCGCGT TTCGAGACGA CGCAGACCTT GCAGCGTTCG CTCGGTCCAC CGCTGCCGGC CGCACCAGGC GAACTGGCTT TCGATCCGGT GGCCGATCCG CTGCAGGCCG CACAACTGCT GCGCGAGCAG GTTCCGGATT GGCCGCATCG CGACCCGCGC GGCTTCGCGC TCGCCGTCGC GCGCCTGAAC GAGACGGCGC AGGTGCTGGC GCGCGCCAGG CTGGCGCTGC CGCCGGCCCA GCGCGCGGCT TGGCTCGAGA AGGCCCGTTC GCTGCTGTCC GGCCCCACCG GGCCGGGCCA GCAGGAGCGC GCGCTGGCGC GGCTCGCGCT CGAGTGGTCG AACACGGCGG CCACGATGGG CGCCGATGCG CTCTACGCCC TGAGGCCGGC GGCCTGGGTC GCACTGCGGG TCGGCGCCTC CGATCCGCTG GTCGAGTCCT TGTTGGCCGC ATCGTCGGAA CCGGTGCTGT GGCTCGATGC CGATCTGCGT GCCCCCGGCC TTCGCAGTGT TCCCGGTGCA GTGCAGGTGA GCGAGTGCGA CGATTTCGAG GACGAGGCGC AGCGGGCGGC GGCGCAGGTG CTGGCTCATC TGGCGCAGGG CGAGCAGCCG GTGGCCCTGG TGGCCCTTGA CCGCGTGCTG GTGCGTCGCG TGCGAGCGCT GCTCGAGCGG CAGCAGGTTC CGGTGAGCGA TGAGACGGGC TGGAAGCTGT CGACCACCCG TGCAGGCGCC ACGGTGATGG GCCTGCTGCG CGCGGTGCAT CCCCGCGCAG CGACCGACGA CCTGCTCGAC TGGCTGGCCT CGGCGCCAGC CCCGGTGGAT GGCCGTGCGG CGCTCGATGC CGCGTGGCGA CGCGACGGCA TCACCGCGTT GCGGCAGGTC GACGAGGCCC GCCTCGAGCC TGCTGCGCTC GCCCTTTGGC AGCAGTGGCT CGCGATCGGC GAGCCCTTGA GCGCAACCCG CCGCCTGGCG CTGGGCGAAT GGCTGTCCCG CCTGCGCGAG GCGCTGCTGC GCGCCGGGCT GTGGGAGTCG CTGCTGGGCG ACGCGGCCGG TCGGCAAGTC ATCGATGCGC TGCGGTGCCG CGCCGAGCCA CCGGCCGGCA GCGCCTGGGG GCAGCAGGCG GCGCGCGTGC GCTTCGATGC CGACGGCTTG CGCGACTGGG TCGACGGCGT GCTGGAGGCG GTTTCATTCG AGCCGCCGTC GCCCGACCTC GGCGGTGCGG CGCCGGTGAT CCTCACGCCG CTGGCGCGCG CGATGCTGCG TCCGTTCGCA GCGGTCGTGT GTCCGGGTGC GGATGCGGCG CATCTCGGCG CGCTGCCGAA GCCGCAGGCC TTGCTGGGCG ACGCACTGGC GGCCGCGCTC GGCCTGCCGT CGAGCGCGCA GCGTCGCGAG CACGAGCGAC GGGCCTTCGC GCAGTTGCTG CGGGTGCCGC AGCTCACGCT GCTGCACCGC CGGCGCGACG GGGCCGAGCC GCTGCAGGCC AGCCCGCTGT TGCTGCAACT GCAGTTCGAC GCACGCGAAG CCGTCAGGTC GGGCGGTGAG CCGCGGACGC CCGTCGCCGT CGTGCCGCGC CCGCTCGCGC ACCCCTTGCC GGTCGCGCCG GCGCTGTTGC CCGACTCGCT CAACGCCACG GCCTACGAAG CGCTGCGCGC CTGTCCCTAT CGCTTCTTCG CGCAGCGCCT GCTGGGCCTG GCCGAAGCCG AGGAACTCGA CGACGCCGTC GACAAGCGCG ACTACGGCAC GTGGCTGCAT GCGGTGCTGC AGGACTTCCA CCGCCAGCGG CAGCCCGGTG CGCCGCAGGA CGATGCCGCC TTGCTGCTGC GCATTGCCCG CGCGCGGCAG GCGCTGCTGG CGCGAGACGA TGCCGATTTC CTGCCGTTCG CCGTGTGGTT CGAGGACCTG CTGCCGCGCT ACCTCGCCTG GTGGCATGCC GAAGAGGCGC TGGGCGCGAA CGTGATCGAT ACCGAACTCG AACTGCTAGC ACAGCCGCCA GCGCTGGCGG CCGCCGGCCT GCGCCTGCGC GGCACGCTGG ACCGCATCGA TGCCGTGCCG GGCAAGGGGG GCCACGGTGC GCACCGCATC CTCGACTACA AGACCTCCAG CGAGACCACC CTGCGCGAGC GCCTGCGGCA GCCGCTCGAG GACACCCAGC TGCCGTTCTA CGCCGCGCTG CTGGACGCGT CGCGCGGCGT CCCGCCAGGC GACGTGCAGG CCGCCTACCT GTCGCTCGAC GGGCGCGAGG GCGTGAAGCT GCTGGCGCAT CCCGACGTGG CCGCCAGCGC CGCGACGCTG CTCGAAGGCA TCGCGGCCGA CTTCACGCGC CTGCAGGCCG GCGCGCCGAT GCCGGCGCTG GGCGAGGGCA GCGCCTGCGA GCACTGCAGC GCACGCGGCC TGTGCCGGCG CGACCACTGG CGCGAGGACC GGGCATGA
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Protein sequence | MRSSHELPGH NDFDTRPPGA PRGAGPARYG DDRRIPPLNP TPDPAAKDMP PEADLAVAAC WTRLVREIAA FSRREALASR DVVVLLPFAQ HLSLARAAWL ALDHAPWIPR FETTQTLQRS LGPPLPAAPG ELAFDPVADP LQAAQLLREQ VPDWPHRDPR GFALAVARLN ETAQVLARAR LALPPAQRAA WLEKARSLLS GPTGPGQQER ALARLALEWS NTAATMGADA LYALRPAAWV ALRVGASDPL VESLLAASSE PVLWLDADLR APGLRSVPGA VQVSECDDFE DEAQRAAAQV LAHLAQGEQP VALVALDRVL VRRVRALLER QQVPVSDETG WKLSTTRAGA TVMGLLRAVH PRAATDDLLD WLASAPAPVD GRAALDAAWR RDGITALRQV DEARLEPAAL ALWQQWLAIG EPLSATRRLA LGEWLSRLRE ALLRAGLWES LLGDAAGRQV IDALRCRAEP PAGSAWGQQA ARVRFDADGL RDWVDGVLEA VSFEPPSPDL GGAAPVILTP LARAMLRPFA AVVCPGADAA HLGALPKPQA LLGDALAAAL GLPSSAQRRE HERRAFAQLL RVPQLTLLHR RRDGAEPLQA SPLLLQLQFD AREAVRSGGE PRTPVAVVPR PLAHPLPVAP ALLPDSLNAT AYEALRACPY RFFAQRLLGL AEAEELDDAV DKRDYGTWLH AVLQDFHRQR QPGAPQDDAA LLLRIARARQ ALLARDDADF LPFAVWFEDL LPRYLAWWHA EEALGANVID TELELLAQPP ALAAAGLRLR GTLDRIDAVP GKGGHGAHRI LDYKTSSETT LRERLRQPLE DTQLPFYAAL LDASRGVPPG DVQAAYLSLD GREGVKLLAH PDVAASAATL LEGIAADFTR LQAGAPMPAL GEGSACEHCS ARGLCRRDHW REDRA
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