| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1277 |
|---|
| Symbol | |
|---|
| ID | 4785854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1374801 |
|---|
| End bp | 1375502 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640089843 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001020474 |
|---|
| Protein GI | 124266470 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0649233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.253886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGAG TGCTGGTGGT GGAAGACGAG TCGGCGATCG CCGAACTGAT TTCGATCAAC
CTGCGGCATG CCGGCTACGA AGTGACGATC GCGGCTACCG CCGACCAGGC GCAGCTCGCG
ATCGACAGCG TGCTGCCCGA TCTGGTGATC CTGGACTGGA TGCTGCCGGG CCAGTCGGGT
CTGGCGCTCG CGAAGCGCTG GCGCGGCGAG AGCCGCACCA AGGAGCTGCC GGTCATCATG
CTGACCGCGC GCGCGGAGGA GGGCGACAAG GTCGCCGGCC TCGACGCGGG CGCCGACGAC
TACCTGACCA AGCCGTTCTC CACCCACGAG CTGATGGCGC GCATCCGTGC CGTGCTGCGC
CGCAAGGCGC CGGAAGCGCT CGACAGCGCT GTCGAACTCG GCGTGCTGAG GCTCGACCCG
TCGACGCGCC GTGTGGCACG CGGCGAGCAG GAGGTCAAGA TCGGCCCCAC CGAGTTCCGT
CTGTTGCATT TCCTCATGAC GCACCCCGAG CGGGTGCACA GCCGTGCCCA GTTGCTCGAC
CGCGTGTGGG GCGACCATGT CTTCATCGAG GAGCGCACGG TCGACGTGCA TGTGAAGCGC
CTGCGTGAAG CGCTGGCGCC GGTGGCCTGC TCGACGATGA TCGAGACGGT GCGAGGCGCC
GGTTACCGCC TGACGCAGCA GATGGCGGCC GCCGCGGCCT GA
|
|---|
| Protein sequence | MSRVLVVEDE SAIAELISIN LRHAGYEVTI AATADQAQLA IDSVLPDLVI LDWMLPGQSG
LALAKRWRGE SRTKELPVIM LTARAEEGDK VAGLDAGADD YLTKPFSTHE LMARIRAVLR
RKAPEALDSA VELGVLRLDP STRRVARGEQ EVKIGPTEFR LLHFLMTHPE RVHSRAQLLD
RVWGDHVFIE ERTVDVHVKR LREALAPVAC STMIETVRGA GYRLTQQMAA AAA
|
|---|
| |