| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1266 |
|---|
| Symbol | |
|---|
| ID | 4785843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1363881 |
|---|
| End bp | 1364351 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640089832 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020463 |
|---|
| Protein GI | 124266459 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein |
|---|
| TIGRFAM ID | [TIGR00253] putative RNA-binding protein, YhbY family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0525108 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGCCA TTCAACTCAC GCCTGCCGAG CGCAAGGCCC ACCGTGCCGA TGCGCACCAC
CTCGATCCGG TCGTGATGAT CGGCGGCGAG GGTCTGACTC CCGCCGTCAC CAAGGAGGCA
GACGCCGCGC TGAAGGCCCA CGGCCTGATC AAGGTACGCG TGTTCTCCGA CGAACGCGAG
ACCCGCGAAA CGATCTTCGC CACGCTGTGC GAACAGCTCG GCGCGGCGCC CGTCCAGCAC
ATCGGCAAGC TGCTGGTGCT GTGGCGCCCG GTCGAGCCGA AGGAAAAGAC GCCGGACGAA
CACCGCCAGG CCGGCCCGCG GGTGGTGAAG ATCCTGAAGT TCTCCAAGAG CGGCAACCAC
CGTGCCCAGG TGAAGAAGCT CACCGTGCTG GGCAACCAGC GCATCACCTC CGGCGGCATC
GTCAAGCGGG CCAAGGAGCG GCTGCCAAGC AAGAAGAAAC TGGGCGACTG A
|
|---|
| Protein sequence | MPAIQLTPAE RKAHRADAHH LDPVVMIGGE GLTPAVTKEA DAALKAHGLI KVRVFSDERE
TRETIFATLC EQLGAAPVQH IGKLLVLWRP VEPKEKTPDE HRQAGPRVVK ILKFSKSGNH
RAQVKKLTVL GNQRITSGGI VKRAKERLPS KKKLGD
|
|---|
| |