| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1106 |
|---|
| Symbol | trmD |
|---|
| ID | 4784588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1183913 |
|---|
| End bp | 1184683 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640089669 |
|---|
| Product | tRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_001020302 |
|---|
| Protein GI | 124266298 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTCG ACGTCCTGAC GCTGTTCCCC GAACTGTTCG CTCCGTTCCA GGCCGTGGGC
GTGACGCGCC GCGCCTTCGA GAGCGGCGCC ATCGATCTGA AGCTCTGGCA GCCCCGTGAC
TTTGCCGACA ATGCCTACCG CCGCGTCGAT GACCGGCCCT ACGGCGGTGG CCCCGGCATG
GTGATGCTGG TCGAGCCGCT GGAGCGCGCC TTGGCCGCGG TGCGCGATGA CCAAGCCGCT
GCAGGGGCCG CTCGCACGCC GGTCCTGCTG TTCAGCCCGG CCGGCGCGCC GCTCACGCAG
AGGCGCGTCG AAGCGCTGGC GTCCGAGGCA GGCGCGGTCC TGGTATGCGG TCGCTACGAA
GGGATCGATC AGCGCTTCAT CGACCGCCAT GTCGACGAGG AACTGAGCCT CGGCGATTTT
GTGTTGTCGG GCGGCGAACT GCCGGCCCTG GCCCTGGTCG ATGCCGTGGC GCGCCTGCAG
CCCGGCGTGC TGAACGACCA GACCTCGCAT CAGCAGGACA GCTTTTCCGA TGGCCTGCTG
GACTGCCCGC ACTACAGCCG CCCGGAGCAT CTGGGAGACG CCGCCGCGGA CGGCGTGCCG
GCGACGCTGA TGTCCGGCCA TCATGCCGAG ATCGCCCGCT GGCGGCGCGA GCGGCAGTTG
GAACTGACGG CCAGGCGCCG CCCCGATCTG ATCGCCGCTG CCCGCGCCCA GGGGCGGCTG
ACGAAGGCGG ACGAACGCTA CCTGCAGTCG CTGCCGGGAC TTGGCCTATA A
|
|---|
| Protein sequence | MRFDVLTLFP ELFAPFQAVG VTRRAFESGA IDLKLWQPRD FADNAYRRVD DRPYGGGPGM
VMLVEPLERA LAAVRDDQAA AGAARTPVLL FSPAGAPLTQ RRVEALASEA GAVLVCGRYE
GIDQRFIDRH VDEELSLGDF VLSGGELPAL ALVDAVARLQ PGVLNDQTSH QQDSFSDGLL
DCPHYSRPEH LGDAAADGVP ATLMSGHHAE IARWRRERQL ELTARRRPDL IAAARAQGRL
TKADERYLQS LPGLGL
|
|---|
| |