| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0943 |
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| Symbol | |
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| ID | 4787325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 997024 |
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| End bp | 999399 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640089504 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001020140 |
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| Protein GI | 124266136 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAATG CAACGTTCGG AAAAATCGAG AGGGCGTTCG AGCGCCTGAT CCACCACCGC
CGCTGGGTGG TGCTGACGGT GGCGCTGCTG ACGGCGGTGA TGGGCTACCT GGCCACCCAC
GTCGAGGTGA AGACGATCTT CAGCGACCTG CTGCCGAAGA ACCACCCCTA TGTGGCGGTG
AACCAGAAGT TCAAGTCGAC CTTCGGCGGC TCGAACATGG TCAGCATCAT GGTCGAGACC
GACAATGGCG ACATCTTCGA CACGAAGGTG CTGCAGAAGG TGCAGAAGCT GACGGTCGGC
CTGCAACAGG TCGACAGCGT CGACACCTAC CAGATCGTCT CGATCGCCTC CAAGAAGATC
AAGGAGGTGC GGGCCTCGAC CGAGGGCGTG GAGTCGCGCC CGATCATGTG GCCCAACCTG
CCGCAGACCC CGGGCGAGAT GGCGGTGCTG AAGGAGGCGG TGCTCAACAA CCCGCTGATC
TACGGCCCCT ACGTCTCGAT GGACCTCAAG GCCACGCTGA TCACGGCCGA CTTCCTCGAC
GGCGAGATCA ACTACAGCAA GGCCTTCGAC CAGATCATGG GCTTGGTCAA GGAGGCATCG
GGCGACGGCG TCAAGGTGCG GGTGGTGGGC GAACCGGTGC TGTACGGCTG GGTCAACTTC
TACCTCGACG AGACGCTCAA GATCTTCTTC GCAGCGATCG CCTCGCTGGT GCTGATCCTG
ATGCTGATCA CGCGCACCTG GCACGGCACC CTGCTGCCGC TGCTGGCCGG CGTGGTGAGC
GCGATCTGGG CGCTCGGCGC CGCCCGGTTG ATGGGCTTCC ACCTCGACCC GCTGGTGATC
GTGGTGGCGT TCCTGATCAC CGCGCAGGCG ATCTCGAACT CGGTGCAGCT GATATCGCGC
TACGACGACG AGATCGCCGC CGGCGCCACC AGCTCGGCCG CCGCGGCCCT GGCCAGCGTG
AAGAACCTCT TCAAGCCCAG CATGCTGGCG ATCGTGGCCG ACGCCGGCTG CGTGCTGGTG
GTGGCGCTCA CGCCGATCCC GATGCTGGAG AAGATCTCCT ACATCGGCAC GGTGTGGATC
TTCTCGATCC TGGTCAGCGC GCTGCTGCTG ACGCCGGTGA TGCTGTCGTA CTTCAAGCCG
AAGCAGAGCT ACGTACATCC ACTGAACATC CGCCCGCTGC TCGACGCGGT GCTGCGCCTG
TGCGCCAAGA TCGTGACCAC GCGCTGGCGC TACGGCGTGC TGGGCACCGC GCTGGTGGTG
TTCTTCGTGT CGGGCTGGTA CGCCTTCAAC CTGAAGGTCG GCGACGCGAA CCCGGGTTCG
CCGATCCTGT GGCCGGACTC CTCCTACAAC CGAGACGCCA CCGATATCAA CCGCCAGTTC
CAGGGTTCGG ATCGCATGTT CGTGGTGGTC GCCGGCAAGG AGAAGGGTGC GCTGCGCGAG
CCGGAAGTGC TCAAGAGCAT GAGCGACTTC CAGCGCTACA TGGAGGCCCA GCCGGAGGTC
GGCGGCAGCA TCTCGCTGGC CGACGTGCTG CCCCAGGTGC GCCGCGTGCT GCGCGAAGGC
AACCCGATGT ACGCCGAACT CGGCAACGAC GCCAACGAGA ACGGCGAGCT GACCTACATG
TTCGTCTCCG GCTCCGACCC GGGCGACATG GACCGCTACG CCGACGCCGA CGCGAAGAAC
GGCGCCGTGA CCCTGTTCTT CCGCGACCAC CAGGGCGAGA CCATCCGCAC CGCGATCGCC
CGCGTGCAGG ACTACGTGGC GCAGAACGCG ATGGAGAAGG CGGACTACCT GCTGGCCGGC
GGCCTGGTGG GCGTGCTGGC GGCGGTGAAC GAGGTCATCC TCGCGGGTCA GATCGAGGCC
ATCGCGCTGG CACTGCTGGT GCTGGTGGTG TGCTGCACGG TGACCTACCG CTCCACCGTG
GCCGGGGTGT TCTTCATGAT CCCGGTGATG CTGTCCAACA CCATCACGTT CAGCTACATG
GCCTGGCACG GCATCGGCAT GAACATCAAC ACGCTGCCGG TGGTGGCGCT GGGCATCGGC
CTGGGGGTGG ACTACACCTT CTACATCGTC GACGGCATCC GCGAGGAACT GCACCACTCC
GACAACGTCG AGGCCGCCAT CATCAAGGCG CTCAGCAGCG CCGGCCGCGG GGTCCTGATC
ACCGCGCTCA CGCTGATCAC CAGCGTCGGG CTGTGGAGCT TCTCGTCGCT GCGGCTGCAG
GCCGACATGG GCCTGCTGAT CGCGCTCTGG CTGTTCATCT CGGCCTTCAG CGCGCTCTTC
ATCATGCCGG CGATCGTCTA CGTGTTCCGC CCCGCCTTCA TCGTGGGCAG CAAGCAGCGC
CCGATCGAGC GCGCCAGTTC CGCAGTGGTT GTGTGA
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| Protein sequence | MKNATFGKIE RAFERLIHHR RWVVLTVALL TAVMGYLATH VEVKTIFSDL LPKNHPYVAV
NQKFKSTFGG SNMVSIMVET DNGDIFDTKV LQKVQKLTVG LQQVDSVDTY QIVSIASKKI
KEVRASTEGV ESRPIMWPNL PQTPGEMAVL KEAVLNNPLI YGPYVSMDLK ATLITADFLD
GEINYSKAFD QIMGLVKEAS GDGVKVRVVG EPVLYGWVNF YLDETLKIFF AAIASLVLIL
MLITRTWHGT LLPLLAGVVS AIWALGAARL MGFHLDPLVI VVAFLITAQA ISNSVQLISR
YDDEIAAGAT SSAAAALASV KNLFKPSMLA IVADAGCVLV VALTPIPMLE KISYIGTVWI
FSILVSALLL TPVMLSYFKP KQSYVHPLNI RPLLDAVLRL CAKIVTTRWR YGVLGTALVV
FFVSGWYAFN LKVGDANPGS PILWPDSSYN RDATDINRQF QGSDRMFVVV AGKEKGALRE
PEVLKSMSDF QRYMEAQPEV GGSISLADVL PQVRRVLREG NPMYAELGND ANENGELTYM
FVSGSDPGDM DRYADADAKN GAVTLFFRDH QGETIRTAIA RVQDYVAQNA MEKADYLLAG
GLVGVLAAVN EVILAGQIEA IALALLVLVV CCTVTYRSTV AGVFFMIPVM LSNTITFSYM
AWHGIGMNIN TLPVVALGIG LGVDYTFYIV DGIREELHHS DNVEAAIIKA LSSAGRGVLI
TALTLITSVG LWSFSSLRLQ ADMGLLIALW LFISAFSALF IMPAIVYVFR PAFIVGSKQR
PIERASSAVV V
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