| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0794 |
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| Symbol | |
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| ID | 4784478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 827901 |
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| End bp | 829547 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640089355 |
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| Product | alpha subunit of malonate decarboxylase |
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| Protein accession | YP_001019991 |
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| Protein GI | 124265987 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4670] Acyl CoA:acetate/3-ketoacid CoA transferase |
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| TIGRFAM ID | [TIGR01110] malonate decarboxylase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0723769 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA GCTGGAACCG CGGCGCCGAG CAGAAGCGGC AGCGCCTGGC GGCGGCCCGG
GCGCAGGGGC TGGACAAGCT CGTCCCGGCC GAGCGGGCGA TCGACCTGCT GGAAGCGGTG
CTGACGCCGG GCGACCGCCT CTGCGTCGAG GGCAACAACC AGAAGCACGC CGACTTCCTG
TCGGCCTGCC TCGCCCAGGT GGACCCGGCG CGCGTCAACG GGCTGCACAT CGTGCAGTCC
AACCTCGCGC TGCCGCAGCA CCTCGACGTG TTCGAGCGCG GCATCGCCGC GAAACTGGAC
TTCTGCTACT CGGGCGAGCA AGGCGTGCGC ATGGCGCGGC TCATCAACGA GGGCCGCATC
GAGGTCGGCG CGATCCACAC CTACCTCGAG CTCTACAGCC GCTACTTCGT CGACCTGACG
CCGCAGGTGG CCTTCGTGGC CGCGCAGAGC GCCGACGCCG AGGGCAACCT CTACACCGGC
CCCAACACCG AGGACACACC GGCGGTGGTG GAAGGCACGG CCTTCAAGAA CGGCATCGTG
ATCGCCCAGG TGAACGAGAT CGTCGAGCGC GTGCCGCGCG TCGATGTGCC GGCCGGCTGG
GTGAGCTTCG TGGTGCCTTC GCCGAAGCCG CACTACATCG AGCCGATCTT CACGCGCGAC
CCGGCGCAGA TCAGCGAGAT CCAGGTGCTG ATGGCCATGA TGGTGATCAA GGGCCTGTAC
GCGCCCTACG AGATCAACCG CCTGAACCAC GGCATCGGCT TCGACACCGC GGCGATCGAG
CTGATCCTCC CGACCTACGC CGCCTCGCTG GGGCTGAAGG ACAAGATCTG CAGCTACATG
ACGGTCAACC CCTGCCCGAC GCTGATCCCG GCGATCGAGG CCGGCTTCGT CAAGGGCATC
CACTGCGCCG GCTCCGAGCT CGGCATGGAG CGCTACATCG AGGAGCGCTC CGACGTGTTC
TTCAACGGTC CCGACGGCAC GATGCGCTCG AACCGCGTGT TCTGCCAGCT CGCTGGCCAC
TACGTCGACC TGTTCATCGG CTCCACGCTG CAGATCGACC TGGAGGGCAA CTCCTCCACC
GCCACGCTCA ACCGCATCGC CGGCTTCGGC GGCGCGCCCA ACTTCGGCTC GGAGTCGCGC
GGCCGGCGCC ACGCCAGCCC CGGCTGGCTG AAGGCCGGCG AGGAGAGCGC CGCCTCGCGC
ATGTCGGCCA TGCCGCGCGG CCGCAAGCTG GTGGTGCAGC TGGTCGAGAC CTTCCGCGAG
AAGATGCAGC CGACCTTCGT CGAGCGGCTC GACGCCTGGC AGCTGCAGGA GGATTTCGAC
CTGGACCTGC CGCCGGTGAT GATCTACGGC GACGACGTGA CCCACATCGT CACCGAGGAA
GGCATCGCCC ACCTGCACCG CTGCAACACG CTGGCCGAAC GCGAGCAGGC GATCCGCGGC
GTGGCCGGCT ACACGCCGGT GGGGCTGGCG CGCGACCCGC TCGCGGTCGA GGCGCTGCGC
CGCCAGGGCA TCATCCAGCG GCCCGAGGAC CTGGACATCG ACCCGCGCCT CGCCACGCGT
GACCTGCTGG CCGCGAAGTC GATCAAGGAC CTGGTGCGCT GGTCCGGCGG GCTCTACGAC
CCGCCCAACC GTTTCCGCAA CTGGTGA
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| Protein sequence | MTKSWNRGAE QKRQRLAAAR AQGLDKLVPA ERAIDLLEAV LTPGDRLCVE GNNQKHADFL
SACLAQVDPA RVNGLHIVQS NLALPQHLDV FERGIAAKLD FCYSGEQGVR MARLINEGRI
EVGAIHTYLE LYSRYFVDLT PQVAFVAAQS ADAEGNLYTG PNTEDTPAVV EGTAFKNGIV
IAQVNEIVER VPRVDVPAGW VSFVVPSPKP HYIEPIFTRD PAQISEIQVL MAMMVIKGLY
APYEINRLNH GIGFDTAAIE LILPTYAASL GLKDKICSYM TVNPCPTLIP AIEAGFVKGI
HCAGSELGME RYIEERSDVF FNGPDGTMRS NRVFCQLAGH YVDLFIGSTL QIDLEGNSST
ATLNRIAGFG GAPNFGSESR GRRHASPGWL KAGEESAASR MSAMPRGRKL VVQLVETFRE
KMQPTFVERL DAWQLQEDFD LDLPPVMIYG DDVTHIVTEE GIAHLHRCNT LAEREQAIRG
VAGYTPVGLA RDPLAVEALR RQGIIQRPED LDIDPRLATR DLLAAKSIKD LVRWSGGLYD
PPNRFRNW
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