Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0600 |
Symbol | lysS |
ID | 4785701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 631016 |
End bp | 632542 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640089159 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001019797 |
Protein GI | 124265793 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.834751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA CGCCCCCGAA CGCCGCCACG CCCGGCACCG ACGACAACCA GCTGATCGCC GAACGCCGCG AGAAGCTCGC TGCACTGCGT GCGCAGGCCC AGGCCACGGG GAGAGCCGCC TTCCCCAATG ACTTCAAGCC GGGCGACCAT GCCGTCGACC TGCACCGCCT GCACGAGGGC AAGAGCGCCG AGGAGCTGGA GGCGCTGGCC ATCCCGGCCC GCATCGCCGG CCGCATGATG CTCAAGCGCG TGATGGGCAA GGCCTGCTTC GCGACGCTGC AGGACGGCTC GGGCCGCATC CAGCTCTACA TCACGTCCGA CGCCGTCGGC CCGGAGGCGC TGGCCGCCTT CAAGCACTGG GACCTGGGCG ACATCCTCGG CGCCGAGGGC ACGCTGTTCA AGACCCGCAC CGGCGAGCTG AGCCTCAAGG TCGGCACGAT CCGGCTGCTG ACCAAGAGCC TGCGGCCACT GCCCGACAAG TTCCACGGCA TGGCCGACCA GGAGCTCAAG TACCGCCAGC GCGAGGTCGA CCTGATCATG GACGAGGCCT CGCGCGAGCG CTTCCGCGCG CGCAGCAAGG CCGTGAGCTC GATCCGGCAG TTCATGGTCG AGCACGGCTT CCTCGAGGTC GAGACGCCGA TGCTGCACCC CATCCCCGGC GGCGCGAACG CCAAGCCCTT CGTGACGCAC CACAACGCGC TCGACCAGCA GATGTTCCTG CGCATCGCGC CCGAGCTCTA CCTGAAGCGG CTGGTGGTGG GCGGCTTCGA GCGGGTGTTC GAGATCAACC GCAACTTCCG CAACGAGGGC GTGTCGGTCC GGCACAACCC CGAGTTCACG ATGATGGAGT TCTACGCGGC CTACTGGACC CACCACGACC TGATGGACTT CACCGAGCAG ATCCTGCGCC ACGCCGCGCG CAAGGCGGTG GGCACGGCGC AGCTCGCCTA CGGTGGGCAG GCCGTCGACC TGGAATCGCC GTTCGCGCGG CTCTCGGTGC GCGACTCGCT GATCGCCCAT GCAGGATTGA GCGCGGCGGA AGCCGCCGAC ACCACGGTGC TGCGCGCGAA GCTCGAAGCG CATGGCGAGA AGGCTCCGGC GCACTGGTCG CTCGCCGAAC TGCAGTTCGG CCTGTTCGAG GCGGCCGTCG AGGAAAAGCT GTGGCAGCCG ACCTTCATCG TCGACTACCC GGTGGAGGTG TCGCCGCTGG CCCGCGCCTC CGATGCCGAC CCGACGATCA CCGAGCGCTT CGAGCTCTTC ATCACCGGCC GCGAGTTCGG CAACGGCTTC TCGGAGCTCA ACGACCCCGA GGACCAGGCC GCGCGCTTCG CGGCCCAGGC CTCGAACAAG GACGCCGGTG ACGAGGAGGC GATGTACTTC GACACCGACT ACATCCGCGC GCTCGAGCAC GGCCTGCCGC CCACCGGCGG CTGCGGCATC GGCATCGACC GACTGATGAT GCTGTTGACC GACTCGCCGA ACATCCGCGA CGTGATCCTG TTCCCCGCGC TGCGGCGCGA GGGCTGA
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Protein sequence | MTTTPPNAAT PGTDDNQLIA ERREKLAALR AQAQATGRAA FPNDFKPGDH AVDLHRLHEG KSAEELEALA IPARIAGRMM LKRVMGKACF ATLQDGSGRI QLYITSDAVG PEALAAFKHW DLGDILGAEG TLFKTRTGEL SLKVGTIRLL TKSLRPLPDK FHGMADQELK YRQREVDLIM DEASRERFRA RSKAVSSIRQ FMVEHGFLEV ETPMLHPIPG GANAKPFVTH HNALDQQMFL RIAPELYLKR LVVGGFERVF EINRNFRNEG VSVRHNPEFT MMEFYAAYWT HHDLMDFTEQ ILRHAARKAV GTAQLAYGGQ AVDLESPFAR LSVRDSLIAH AGLSAAEAAD TTVLRAKLEA HGEKAPAHWS LAELQFGLFE AAVEEKLWQP TFIVDYPVEV SPLARASDAD PTITERFELF ITGREFGNGF SELNDPEDQA ARFAAQASNK DAGDEEAMYF DTDYIRALEH GLPPTGGCGI GIDRLMMLLT DSPNIRDVIL FPALRREG
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