| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0581 |
|---|
| Symbol | |
|---|
| ID | 4785682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 609764 |
|---|
| End bp | 610396 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640089140 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001019778 |
|---|
| Protein GI | 124265774 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC GCGTCATCCT CTGCGACGAC CACGCACTGA TCCGGCGCGG CATCCGCGAC
ACGCTGTCGG ATGCGCCCGA CATCGAGGTC GTGGGCGAGG CGGGCGACTA CGGCGAGCTG
CGCAGCCTGC TGCGCGACAC CGACTGCGAC GTGCTGGTGC TCGACATCAA CCTGCCGGGT
CGCAGCGGCC TCGACGTGCT GCACGTGCTG AAGGAGGAAG GCTCGGCGCT GCGCGTGCTG
GTGGTGTCGA TGTACCCCGA GGACCAGTAT GCGATCCGCG CGCTGCGCGC CGGCGCCTAC
GGCTACGTCA ACAAGGGCAG CGACACCCAG CTCATCGTCG AGGCGGTGCG GATGGTGGCC
AAGGGCCGCA AGTACATCAC GCCCGAGATC GCGCAGATGC TGGCCGAGAG CCTGAGCCAG
CCGGCCACCG AGATCGCCCA CGAGAAGCTG TCGGACCGCG AGCTGCAGAC GCTGGTGCTG
ATCGCGTCGG GCAAGCGGCT GTCGGACATC GCCGCCGAAC TGACGCTGAG CCCGAAGACC
GTCAGCGTCT ACCGCGCCCG CGTGCTGGAG AAGCTGGCCC TGACCAACAA CTCCGAGCTC
ACGGTCTACG CCATCCGAAA CGGCCTGGTA TGA
|
|---|
| Protein sequence | MTVRVILCDD HALIRRGIRD TLSDAPDIEV VGEAGDYGEL RSLLRDTDCD VLVLDINLPG
RSGLDVLHVL KEEGSALRVL VVSMYPEDQY AIRALRAGAY GYVNKGSDTQ LIVEAVRMVA
KGRKYITPEI AQMLAESLSQ PATEIAHEKL SDRELQTLVL IASGKRLSDI AAELTLSPKT
VSVYRARVLE KLALTNNSEL TVYAIRNGLV
|
|---|
| |