Gene Mpe_A0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A0548 
Symbol 
ID4787371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp582239 
End bp583243 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID640089107 
Producthypothetical protein 
Protein accessionYP_001019745 
Protein GI124265741 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.271041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTGTT CTGCACAGTC CACCGGTGAC TTTGCGACGA CGCCCGCCAG CGTCCCGCAT 
ACCGGCGTTC CACCACCGGC ACCAGGTGTC CGGGACGGGT CTATCGCCCT CCGGCACCTG
ATTGATGCCT ACATGGCCGC CTATGCCGGC CGCGACACCA GCCGCACCCA GCGCCTCGAT
TGGTGGGTGG CCAAGCTCGG CGGCGTCTCG CTGGCCGATC TGACCGACGA CCACGTCTTT
ACAGCCTTGG AGCAGCTCGC CACCCAGCGT GGCCGCTACT TCGCCGGCAA GGACGCCGAC
GGCAAGCCCG TCATGAAGGC CAAGCGCAGG CCGCTGGCGC CCGCCACCCT GAACCGGTAT
CAGGCCGCTC TCTCCGCGGT GCTGACCTGG GCGCAGCGGC GCCGCATCGC CCCGAAGAAC
TGGCAGAACC CCTGCCGGCA CGTCGAGCTG AAGGCCGAGA AGAACGAGAT CGTCCGCTTC
CTCAGCGATG CGGAGCGCAC CGCCCTGCTC GCTGCCTGCC GGAAGTCGTC ATGGCCCCGC
CTCTACCTGC TGGTGATGAT GGGGCTGACC ACCGGTGCCC GTCGCGGCGA GCTGGAGGCC
CTGCGCTGGG CCGACGTGGA CCTTGAGCGG GCCGAGGCTG CCGTGCACCG GTCCAAGAAC
GGCGACAAGA AGGTGCTGCC ACTCGTCCCC GCCGTGGTCG ACGAACTGGC CAAGCATGCC
GGCGCTGCGA ACGCGCTGGT CTTCCCCTCG ACGCGCAGAC CTGACATTGC CTATAACTTC
GATCCTGCTT GGGATCGCGC CCTGAAAGCC GCGGGCGTCA AGAGCTTCAG GTTTCACGAC
CTGCGGCACT CATGCGCCTC TGCGCTGGCC CAGAACGGCG CCACGCTGCT GGAAATCGCC
GAGGTGCTGG GGCACCGGCA GTTGAGCGTC ACGAAGCGCT ACAGCCACCT CGCGACCGAC
CACAAGACCA AGCTCATCAA TCGCGTGCTT GGCGACATTC GTTGA
 
Protein sequence
MNCSAQSTGD FATTPASVPH TGVPPPAPGV RDGSIALRHL IDAYMAAYAG RDTSRTQRLD 
WWVAKLGGVS LADLTDDHVF TALEQLATQR GRYFAGKDAD GKPVMKAKRR PLAPATLNRY
QAALSAVLTW AQRRRIAPKN WQNPCRHVEL KAEKNEIVRF LSDAERTALL AACRKSSWPR
LYLLVMMGLT TGARRGELEA LRWADVDLER AEAAVHRSKN GDKKVLPLVP AVVDELAKHA
GAANALVFPS TRRPDIAYNF DPAWDRALKA AGVKSFRFHD LRHSCASALA QNGATLLEIA
EVLGHRQLSV TKRYSHLATD HKTKLINRVL GDIR