Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0501 |
Symbol | slmA |
ID | 4787098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 541439 |
End bp | 542101 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640089059 |
Product | nucleoid occlusion protein |
Protein accession | YP_001019698 |
Protein GI | 124265694 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.957497 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.22516 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA CGCCGATCCC TGAGCCGCTG GATGCCGCCG ACGACACGCC CGCCGAGGGG GTCGCCGCCG CAGCACCCGT GCGCAAGCGG CCCAAGCCGG GCGAGCGCCG CATCCAGATC CTCCAGACGC TGGCGTCCAT GCTGGAACAG CCCGGTGCGG AGCGCATCAC GACGGCGGCC CTGGCGGCCA AGCTCGACGT CAGCGAAGCG GCGCTGTACC GGCACTTCGC CAGCAAGGCG CAGATGTTCG AGGGGCTGAT CGATTTCATC GAGAGCAGCG TGTTCACGCT GGTCAACCAG ATCGTCGAGC GCGACACCGA TCCGCGCGAT CAGGTGCACA AGATGACCAC CGTGCTGCTG CAGTTCGGCG AGAAGAACCC CGGCATGTCA CGCGTGATGG CGGGCGATGC CCTGGTGTTC GAGAACGAGC GCCTGACGGC GCGCATGAAC CAGTTCTTCG ATCGCTTCGA GTCGCAGCTG CGACAGAGCC TGCGAGCGTT GGCCGAGGCC GGCGGGTCGC AGACGCCGAC CGTCGATGCC CAGGCGCAGG CTTCGGTCCT CGTCAGCTTC GTGCTGGGCC GCTTGCAGCG CTATGCGCGT TCGGGCTTCA AGCGCCTGCC GAGCGAACAC CTCGACGCGG CACTGCGGCA ACTCGCCACC TGA
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Protein sequence | MSDTPIPEPL DAADDTPAEG VAAAAPVRKR PKPGERRIQI LQTLASMLEQ PGAERITTAA LAAKLDVSEA ALYRHFASKA QMFEGLIDFI ESSVFTLVNQ IVERDTDPRD QVHKMTTVLL QFGEKNPGMS RVMAGDALVF ENERLTARMN QFFDRFESQL RQSLRALAEA GGSQTPTVDA QAQASVLVSF VLGRLQRYAR SGFKRLPSEH LDAALRQLAT
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