Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0500 |
Symbol | |
ID | 4787097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 540730 |
End bp | 541461 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640089058 |
Product | hypothetical protein |
Protein accession | YP_001019697 |
Protein GI | 124265693 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.354982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGCCG CCGGCCGGCC GGTCGTCTGG CTGTTCGACC TCGACAACAC GCTGCACGAC GCCTCGCACG CGGCGTTCGG CCTGCTCGAC GAGGCGATGA ACGACTACAT CGCGCAGGCG CTTCGGGTCG ACGCGGCGCA GGCCGACTTC CTGCGGCTCG ACTACTGGCG CCGCTACGGC GCCACGTTGT TGGGGCTGGA GCGGCATCAC GGCATTCGCG CCGCGCACTT CCTCGAGCAC ACCCACCGCC TGCCGGACCT CGAGCAACGG CTGCGCGGGA GCCCGCGTGA CCGCGCTGCG TTGCGAGCGT TGCCGGGGCG CAAGTTCGTG CTGACCAATG CGCCGGCCAG CTACGCCAAG CGCGTGCTGA CGGCGCTCGA CCTGGCGGAT TGCTTCGAGG GCATCGTCAG CATCGAAGGC ATGCGCCTGT TCGGTCATCT GCGCCCCAAG CCCGATGCAC GCATGTTCCG GGTGGTGCTG GCGAGGCTGA AATTGCGGCC GGCGCAGTGC GTGCTGGTCG AGGACACGCT GGCCCACCAG CGCGCGGCGC GCGCCGTCGG ACTGCGCACC GTCTGGATGC AGCGATATGT GTGGCGCAAT GCTCATGGAC CCGAAGTAGG TGCGCGCTTG CGTCGAAAGC CCGCTTATGT GTATGCAAGA ATTCGCTCGC TTTCGACGCT AGCCACCCAC TTCCTCCCCG CCCGCGCGCA TGTCCGACAC GCCGATCCCT GA
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Protein sequence | MAAAGRPVVW LFDLDNTLHD ASHAAFGLLD EAMNDYIAQA LRVDAAQADF LRLDYWRRYG ATLLGLERHH GIRAAHFLEH THRLPDLEQR LRGSPRDRAA LRALPGRKFV LTNAPASYAK RVLTALDLAD CFEGIVSIEG MRLFGHLRPK PDARMFRVVL ARLKLRPAQC VLVEDTLAHQ RAARAVGLRT VWMQRYVWRN AHGPEVGARL RRKPAYVYAR IRSLSTLATH FLPARAHVRH ADP
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