| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0479 |
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| Symbol | |
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| ID | 4784198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 519979 |
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| End bp | 522117 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640089037 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001019676 |
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| Protein GI | 124265672 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.117886 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAT CCCCCACCGC GACGCGCGCT GCCCAGCGTG ACAGCCGGCG CCCGTCCGGG
TTCGGCCATT CCGCGACGAG CGTCTGGCTG CCGCCGGACC CGGGTCACGT CGACACCATC
GCGCAGTCGC ATGAACGCTG TGCCTCGCTG CGGCTGAGCC CGATCCGGCC GCCGGACCAC
ACCCCGCTGA TGCGCTCGGA TCTGGCGGTG GCCCGGGAGC GCAACCGCTG TCTGTCGCTC
CATGCGGTGC CGGTGATGGA GATGCTGCTG GAGCAGATTC TCGCGACGCA GAGCATGGTG
CTGCTGACCG ACGTGCAGGG CACGGTGCTG CATTCGATCG GTCACGACGA CTTCCTGACG
CGTGCGTCCA AGGTCGCGCT GGCGCCGGGC GTCAACTGGA GCGAATCGAG CAAGGGCACC
AACGCCATCG GGACCGCGCT GGTCACCGAA ACGCCGACCA TCGTGCATGC CGACGAGCAC
TTCGTCCACG CCAACCAGTT CCTGACCTGC TCGTCCTCGC CGATCTTCGA TCCGCGCGGC
AACCTGGTCG GCGTGCTCGA CGTCAGCGGC GATCACCACT CCTTCCACGT CCACACGATG
GGCCTGGTGA AGATGTCGGC GCGCATGATC CAGAACCACT GGCTGATCGA GGACAGCCAC
CAGACCCTGC GCCTGCATTT CCACCTGCGT CGCGACTATC TCGGCACGCT GATGGAAGGC
ATCGTCTCCG TCGGGCAGGA CGGCAAGCTG CTAGCCGCCA ATCGCGCCGC ACTGGACATG
CTGCGCCTGT CGGGCGCGGC CTTGCGGATG AATACGGTCA CCGGCCTGTT CGGCGTGTCG
CTCGGAGCGC TGGTCGACCA TTTCGGCTCG ACGCTGTCGA CGCCACTGGA GCTGAGCCTG
CCCGACGGCC GCCAGATCCA TGCGAACGCC CGCTTCAATG GCACCGGCTG GCACCAACTG
GGCCGCGCCC GTGACGATCA GCCGGAGGCG CTCGCCCACG AGGCGGCCCG CGAGCCGGCC
GCCCGCGACG CGCTGCCCGA CACCGCTCGC GAACCGACGG CCCATCCCAA TGCCGTGCCG
CCGTCGCCGA GCCTGCGACA GCTGCAGACC GGGGATGCGC GCATGGACGA CGTGGTCACG
CGCGTCAAGC GAGTGCTCGA CCGCGACATC CCGGTGCTGA TCCAGGGCGA GACCGGCACC
GGCAAGGAAA TGCTGGCCCG CGCGATCCAC CAGGGCTCGC GTCGCGCCAG CGGCCCCTTC
ATTGCCGTCA ACTGCGCATC GATCCCCGAG ACCCTGATCG AGTCGGAGCT GTTCGGCTAC
GAGGAAGGCG CGTTCACCGG CGCGCGCCGC AAGGGCGCCG TGGGCAAGGT CCTGCAGGCG
CACGGCGGCA CGCTGTTCCT CGACGAGATC GGCGACATGC CGCTGGGCCT GCAGGCGCGG
CTGCTGCGGG TGCTGCAGGA ACGTGAGGTC ACGCCGCTCG GTGGCACGCG GGCGCTGCCG
GTCGATGTGT CGGTCATCAG CGCGACCCAT CAACCGCTGC GAGAACTGAT CGACCGCAAG
CAGTTTCGCG AGGACCTGTA CTACCGCTTG AACGGCCTGG TGGTGCAGCT GCCGGCGCTG
CGCGAGCGCA CCGACCTGCT GGCGCTGACC GAGAAGCTGC TCAAGCGCGA GTGCCGTGGT
CGTCTGCTGC GCCTCGACGC CGAGGTGTTG CGGCTGATGC AGGCTTGCCG CTGGCCGGGC
AATATCCGCC AGTTGGCCAC CGTGCTGCGC ACCGCGGTGG CGATGGCTGG CGACGATGCC
GTGATCACCG TCGACCACCT GTCCGAAGAC TTTCTGCAGG ATGCGCGTCG CACACTGGAC
GAGGAGCCCG CCTCGGTCGC CGCCTCTCGG CCGCCGGTGA GCATGGCCCA GCACGCCGAG
CCGCGTCCCT CGGACGCGGC AGCACCCGAC GGCCTCGGCA GCGCCCAGGT CGGCGAAGCG
CCGGGCGGAC GCAGCACGCT GCACCAGCTC GAGCACGACA CCGTCCGCCG CGCGCTGGCC
GAGGCCGGCG GCAACATCTC GGTCGCCGCC CGGCGACTGG GCATCAGCCG CAACACGATC
TACCGCAAGC TCTACTGGCC GCCAGGCGCG GGCCGCTGA
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| Protein sequence | MTASPTATRA AQRDSRRPSG FGHSATSVWL PPDPGHVDTI AQSHERCASL RLSPIRPPDH
TPLMRSDLAV ARERNRCLSL HAVPVMEMLL EQILATQSMV LLTDVQGTVL HSIGHDDFLT
RASKVALAPG VNWSESSKGT NAIGTALVTE TPTIVHADEH FVHANQFLTC SSSPIFDPRG
NLVGVLDVSG DHHSFHVHTM GLVKMSARMI QNHWLIEDSH QTLRLHFHLR RDYLGTLMEG
IVSVGQDGKL LAANRAALDM LRLSGAALRM NTVTGLFGVS LGALVDHFGS TLSTPLELSL
PDGRQIHANA RFNGTGWHQL GRARDDQPEA LAHEAAREPA ARDALPDTAR EPTAHPNAVP
PSPSLRQLQT GDARMDDVVT RVKRVLDRDI PVLIQGETGT GKEMLARAIH QGSRRASGPF
IAVNCASIPE TLIESELFGY EEGAFTGARR KGAVGKVLQA HGGTLFLDEI GDMPLGLQAR
LLRVLQEREV TPLGGTRALP VDVSVISATH QPLRELIDRK QFREDLYYRL NGLVVQLPAL
RERTDLLALT EKLLKRECRG RLLRLDAEVL RLMQACRWPG NIRQLATVLR TAVAMAGDDA
VITVDHLSED FLQDARRTLD EEPASVAASR PPVSMAQHAE PRPSDAAAPD GLGSAQVGEA
PGGRSTLHQL EHDTVRRALA EAGGNISVAA RRLGISRNTI YRKLYWPPGA GR
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