Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0458 |
Symbol | |
ID | 4784177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 496552 |
End bp | 497964 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640089016 |
Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
Protein accession | YP_001019655 |
Protein GI | 124265651 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.227523 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.54749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGTGA TGATGGACTT GCGGTTGGCG CATGCGCTGC TGCCGGGCTC GACGCTCGTC GGCGACCCGG CCACGCCGCT GTTGCGCGTG CACAGCGATA CCCGCACGCT GCGCGCCGGT GACCTGTTCG TTGCGCTCAA GGGCGAGCGC TTCGACGCGC ACGACTTCCT GCCGCAGGCG CGTGCCGCCG GCGCAGTGGC GGCGATCGCC GAGCACGGCC TCGCCGAGGC CGGCCTGGCC GGGCTGCACG TGGCCGACAG CCGCGCCGCG CTCGGCACGC TGGGCGCGAA CTGGCGCGCC CGCATGAGCC TGCCGCTGAT CGCTGTGACC GGCAGCAACG GCAAGACCAC CGTCACGCAG ATGATCGCGA GCATCCTGCG CGCCTGGGTC GGCGACGCGG CATTCGCGAC CGAGGGCAAC TTCAACAACG ACATCGGCGT GCCGCTCACG CTGCTGCGGT TGCGCCAGGA CGCCGACACC TGGCACCGCG CGGCGGTCGT CGAGCTGGGC ATGAACCACG TCGGCGAGAT CGCCCAGCTC GCGCGCATGG CCGCGCCGAC GGTCGCGCTG GTCAACAACG CCCAGCGCGA GCACCAGGAA TTCATGGCCA GCGTCGAGGC GGTGGCCCGC GAGAACGGCG CGGTGATCGA GGTGCTGGGT GCCAACGGCA CGGCGGTCTT CCCGTCCGAC GACGCGCATG CCGCGGTATG GCAGGCGCTG GCCGGCACGC GGCCGACGTT GACGTTCTCG CTCGAAGGTC CGTCCGACTT GGTGGCCGAG GCGGTGTGGA GCGGCGACCA TTGGGCGGCG GTGCTGCACA CGCCGGCCGG CGCCACCGCG ATCCGCCTGC GCGTGGCCGG CTGGCACAAC GTGAAGAACG CGCTCGCCGC GACCGCCTGC GCCCTGGCGG CGGGCTGCCC GCTGGAGGCG GTGGCGCGTG GCCTCGAGGC CTTCGAGCCG GTGAAGGGCC GCTCGCAGGT CAAGGCCCTG CAGCGCGGCG GCCGCGCGGT GACGCTGGTG GACGACAGCT ACAACGCCAA CCCCGACTCG GTGCGCGCGG CGATCGACGT GCTGGCCACG CTGCCCGGCC CGCGCTGGCT GGTGCTGGGC GACATGGGCG AGGTCGGCGA CCAGGGCCCG GCCTTCCACG CCGAGGTCGG CCGCTATGCG GCCGCTTGCG GCATCGACGC GCTGTGGACC GCCGGCGCCG CCAGCGCCGC CGCCGCCGCC GCCTTCGGCC CGGCCGCACG GGCCCACGCG AGCGTGGCCG AGCTGATCGC GGCGCTGGGG CCGGACACGC ACGCCGCCCC GGAGGCCGCG TCCATCGTCG TCAAGGGCTC GCGCTTCATG AAGATGGAGC AGGTGATCGC CGCGCTGCAG GCCGCTGGCG CCGCATCGCC CACCCCGCAC TGA
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Protein sequence | MSVMMDLRLA HALLPGSTLV GDPATPLLRV HSDTRTLRAG DLFVALKGER FDAHDFLPQA RAAGAVAAIA EHGLAEAGLA GLHVADSRAA LGTLGANWRA RMSLPLIAVT GSNGKTTVTQ MIASILRAWV GDAAFATEGN FNNDIGVPLT LLRLRQDADT WHRAAVVELG MNHVGEIAQL ARMAAPTVAL VNNAQREHQE FMASVEAVAR ENGAVIEVLG ANGTAVFPSD DAHAAVWQAL AGTRPTLTFS LEGPSDLVAE AVWSGDHWAA VLHTPAGATA IRLRVAGWHN VKNALAATAC ALAAGCPLEA VARGLEAFEP VKGRSQVKAL QRGGRAVTLV DDSYNANPDS VRAAIDVLAT LPGPRWLVLG DMGEVGDQGP AFHAEVGRYA AACGIDALWT AGAASAAAAA AFGPAARAHA SVAELIAALG PDTHAAPEAA SIVVKGSRFM KMEQVIAALQ AAGAASPTPH
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