| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0285 |
|---|
| Symbol | |
|---|
| ID | 4786894 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 310453 |
|---|
| End bp | 311304 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640088837 |
|---|
| Product | M48 family peptidase |
|---|
| Protein accession | YP_001019482 |
|---|
| Protein GI | 124265478 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.543465 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0172766 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAATC TGATGAAGAC CGCCGTGCTG ATGGCCGCCA TCACGGCGCT GTTCATGGCC
ATCGGCTCGG TGCTGGGCGG GCAGCAGGGC ATGGCGATCG CGCTGGTGGT CGCGCTCGGC
ATGAACTTCT TCAGCTACTG GTTCAGCGAC AAGATGGTGC TGAAGATGTA CAACGCGCAG
GAGGTCGATG CGTCCTCCGC GCCGCAGTTC TACGGCATGG TGCGAGAGCT CGCCGCGAAG
GCGGAGTTGC CGATGCCCAA GGTCTACCTG ATCAACGAGG ACGCGCCGAA CGCGTTCGCG
ACCGGCCGCA ATCCCCAGAA CGCTGCGGTG GCGGCCACCA CCGGCATCCT GCGTGTGCTG
TCCGAGCGTG AACTGCGCGG CGTCATGGCA CACGAGCTCG CGCACGTGAA GCATCGCGAT
ATCCTGATCA GCACCATCAG CGCGACGATG GCCGGCGCCA TCTCGATGCT GGCCAATTTC
GCGATGTTCT TCGGCGGCCG TGGAAGCGAC GGTCGGCCAG CCAACCCGAT CGCCGGCATC
CTGGTGATGC TGCTGGCGCC GCTGGCAGCC AGCCTGATCC AGATGGCGAT CAGCCGGGCC
CGCGAGTTCG AGGCCGACCG GGGCGGCGCC GAGATCTCCG GCGATCCGCA GGCCCTGGCC
AGCGCGCTGC AGAAGATCCA GCGCTATGCC CAGGGGATCC CGCTGGAGGC GGCCGAGCGT
CATCCGGAGA CGGCGCAGAT GATGATCATG AATCCGCTGT CCGGCGGTGG GCTGCGCGGC
CTGTTCAGCA CCCACCCGGC CACCGAGGAG CGCGTGGCCA AGCTGATGGC CATGGTTCCC
CAACGGGTCT GA
|
|---|
| Protein sequence | MFNLMKTAVL MAAITALFMA IGSVLGGQQG MAIALVVALG MNFFSYWFSD KMVLKMYNAQ
EVDASSAPQF YGMVRELAAK AELPMPKVYL INEDAPNAFA TGRNPQNAAV AATTGILRVL
SERELRGVMA HELAHVKHRD ILISTISATM AGAISMLANF AMFFGGRGSD GRPANPIAGI
LVMLLAPLAA SLIQMAISRA REFEADRGGA EISGDPQALA SALQKIQRYA QGIPLEAAER
HPETAQMMIM NPLSGGGLRG LFSTHPATEE RVAKLMAMVP QRV
|
|---|
| |