Gene Mpe_A0259 details

Gene Information

• Locus tag: Mpe_A0259
• Symbol: tktA
• ID: 4786928
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methylibium petroleiphilum PM1
• Kingdom: Bacteria
• Replicon accession: NC_008825
• Strand: +
• Start bp: 279373
• End bp: 281415
• Gene Length: 2043 bp
• Protein Length: 680 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640088811
• Product: transketolase
• Protein accession: YP_001019456
• Protein GI: 124265452
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 12
• Fosmid unclonability p-value: 0.336202
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCTGCCC TCGAATCCCG CACGCCCGCC ACCCCCGACA CCTCGCTGAT GGCCAACGCG 
ATCCGCGCGC TGGCGATGGA CGCAGTGCAA CAGGCCAATT CGGGCCACCC TGGCGCGCCG 
ATGGGCATGG CCGACATCGC GGTCGCGCTG TGGGGCCGAC ACCTGCGCCA CAACCCGGCC 
AACCCGGCCT GGGCCGACCG TGATCGCTTC GTGCTGAGCA ACGGCCACGG ATCGATGCTG 
ATCTATGCGC TGCTGCACCT GACCGGGTAT GCGCTGCCGC TCGAGGAACT GCGCAACTTC 
CGCCAGCTTC ACAGCAAGAC GCCGGGCCAC CCCGAGGTCG GCATCACGCC CGGCGTCGAG 
ACGACCACCG GCCCGCTGGG GCAGGGCCTC AGCAACGCGG TCGGCATGGC GCTGGCCGAG 
AAGCTGCTGG CGGCGGAGTT CAACCGCGAC GGCTATGCCA TCGTCGATCA TCACACCTAT 
GTCTTCCTCG GCGACGGCTG CCTGATGGAG GGCATCAGCC ACGAGGCCAG CGCGCTGGCG 
GGCGCCTGGA AGCTCGACAA GCTGATCGCG CTGTACGACG ACAACGGGAT CAGCATCGAT 
GGCCAGGTGG CGCCGTGGTT CGTGGACGAC ACCGCGAAGC GCTTCGCGGC CTACGGCTGG 
AATGTGATCG GGCCGATCGA CGGTCACGAT GTCGATGCAG TCGACGCGGC GATCACGCAA 
GCCAAGCGCC ATGTGGGCCA ACCCAGTCTG ATCGTGTGCA AGACCGCGAT CGGCAAGGGC 
TCACCGAACC GCGCCAATAC CGCCAAGGCG CACGGCGAGC CGCTCGGCGC CGAGGAGATT 
GCGCTCACGC GGGCCACGAT CGGCTGGCCG CATGCGCCAT TCGAGATCCC GGCCGAGGCC 
TACAACGACT GGGACGCCAA GGACGCCGGT GCCAACCTGC AGGCCGACTG GGAAGGCCGC 
TTCGAGGCCT ACCGCGCCGA CCATCCCGCC GCCGCGGCCG AGTTCGAACG CCGGATGGCG 
GGCGCGCTGC CGGAGAACTT TGCGCAGATC GCAGTGGACG CTGCCATCGC GGCACACGCC 
AAGGCCGAGA CGGTCGCCAG CCGCAAGGCC AGCCAGCTCG CGCTGGAGGC CTTCACCGCT 
GCGTTGCCCG AACTGCTGGG CGGCAGTGCC GACCTCACCG GCTCGAATCT CACCAACACC 
AAGAGCACAC CGGCGCTGCG CTTCGATGCG GCAGGTGCTT CGAACGGTGG CCGCCACATC 
AACTACGGCG TGCGCGAGTT CGGCATGGCG GCGTTGATGA ACGGCATCGC GCTGCACGGC 
GGCTTCATCC CCTACGGCGG CACCTTCCTG ACCTTCAGCG ACTACTCGCG CAACGCCATC 
CGCATGGCCG CGCTGATGAA GCAGCGCGTG GTGCATGTCT TCACCCACGA CAGCATCGGC 
CTCGGCGAGG ACGGCCCGAC GCACCAGAGC GTGGAGCACG CCGCGAGCCT GCGGCTGATC 
CCGAACCTCG ATGTCTGGCG TCCCGCCGAC ACGGCCGAGA CCACGATCGC GTGGACCAAG 
GCGCTGCTGA ACGTGGACCG CCCGACCGCG CTGCTGCTGT CGCGTCAGAA CCTGCCCTAC 
CTGCCGAAGG CCGGGCTCGA CGAGGTGGCG CGCGGCGCCT ATGTGCTGGC CGAGCCGGCC 
GAGGTGGGGC TGAAGAGGAA GGCCCAGGCA GTGCTCATCG CGACCGGGTC CGAGGTGCAG 
CTCGCGCTGC ATGCGCAGCA GCAGCTCGCC GCCGCCGGCA TCGCGGTGCG CGTGGTGTCG 
ATGCCCAGCA CCACCACCTT CGATCGCCAG GACGTGGCCT ACAAGCGCCG CGTGTTGCCC 
GACGGGCTGC CGCGGGTGGC GGTGGAGGCC GGCGTCACCG ATGGCTGGTG GAAGTACGGT 
TGCGCAGCCG TCATCGGCCT CGACACCTAC GGCGAGTCGG CCCCGGCCGG TGCGTTGTTC 
AAGCACTTCG GCTTCACGGC CGAGAACGTG GCCGCGACCG TGCGCCGGGT GCTGAAGAAG 
TGA 

 

Protein sequence

MAALESRTPA TPDTSLMANA IRALAMDAVQ QANSGHPGAP MGMADIAVAL WGRHLRHNPA 
NPAWADRDRF VLSNGHGSML IYALLHLTGY ALPLEELRNF RQLHSKTPGH PEVGITPGVE 
TTTGPLGQGL SNAVGMALAE KLLAAEFNRD GYAIVDHHTY VFLGDGCLME GISHEASALA 
GAWKLDKLIA LYDDNGISID GQVAPWFVDD TAKRFAAYGW NVIGPIDGHD VDAVDAAITQ 
AKRHVGQPSL IVCKTAIGKG SPNRANTAKA HGEPLGAEEI ALTRATIGWP HAPFEIPAEA 
YNDWDAKDAG ANLQADWEGR FEAYRADHPA AAAEFERRMA GALPENFAQI AVDAAIAAHA 
KAETVASRKA SQLALEAFTA ALPELLGGSA DLTGSNLTNT KSTPALRFDA AGASNGGRHI 
NYGVREFGMA ALMNGIALHG GFIPYGGTFL TFSDYSRNAI RMAALMKQRV VHVFTHDSIG 
LGEDGPTHQS VEHAASLRLI PNLDVWRPAD TAETTIAWTK ALLNVDRPTA LLLSRQNLPY 
LPKAGLDEVA RGAYVLAEPA EVGLKRKAQA VLIATGSEVQ LALHAQQQLA AAGIAVRVVS 
MPSTTTFDRQ DVAYKRRVLP DGLPRVAVEA GVTDGWWKYG CAAVIGLDTY GESAPAGALF 
KHFGFTAENV AATVRRVLKK