| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0224 |
|---|
| Symbol | |
|---|
| ID | 4784009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 241226 |
|---|
| End bp | 242182 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640088775 |
|---|
| Product | HPr kinase/phosphorylase |
|---|
| Protein accession | YP_001019421 |
|---|
| Protein GI | 124265417 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism |
|---|
| TIGRFAM ID | [TIGR00679] Hpr(Ser) kinase/phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.395808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCA CCGTCATCAG CGCAGAGGCG CTGTTCGAGG CTCACCGCAC CGCGCTGCGC
TGGGAATGGC TTGCCGGCCA CGCCCACCCG GAGCGCCGCT TCGACGAGGT CGCGGTGCGC
GATGCCCAGT CGGCCGCCGA CCTGGTGGGC TACCTGAACT ACATCCACCC CTATCGCGTG
CAGATCGTCG GGCGACGCGA GGTGCGCTAC CTCGTCGACG TTCCCCCGGA AGACCAGGAA
CGTCGCATCT CGCGCATCGT GACGCTGGAA CCGCCGGTGG TGATCGTGGC CGACCAGCAG
ACGCCGCCGG ACCGGCTGGT CGCGATGTGC GAACGCGCCG ACATCCCCCT GTTCGTGACC
GAGGAATCCG CCGGCCATGT GATCGACGTG CTGCGCGCCC ACCTGAGCCA GCACTTCGCC
GACCGCACCA CGCGGCACGG CGTGTTCATG GACATCCTCG GCCTGGGCGT GCTGCTGACC
GGCGAGTCCG GCCTGGGCAA GAGCGAACTC GGCCTGGAAC TGATCTCGCG CGGCCACGGC
CTCGTGGCGG ACGACGCAGT CGACCTGTAC CGGGTGTCGC AGACGGCCCT GGAAGGCCGC
TGCCCCGACC TGCTGCTGAA CCTGCTCGAG GTGCGCGGGA TCGGCCTGCT CGACATCAAG
GCGATCTTCG GTGAGACCGC GGTGCGTCGC AAGATGCGCC TCAAGCTCAT CGTGCACCTG
GTGCGCAAGG AGACGATGGA GCGCGACTTC GAACGGCTGC CCTACGAGCC GCTTTACGAA
GACGTCCTCG ACGTACCGGT GCTGAAGGCG GTGATCGCGG TCGACGCCGG CCGCAACCTC
GCCGTGCTGG TCGAAGCCGC AGTGCGCAAC ACCATCCTGA AGCTGCGCGG CATCGACACC
TACCAGGAGT TCATCGCCCG CCATCGCATC GCGATGGAAG GCGACGAACC GATCTGA
|
|---|
| Protein sequence | MKPTVISAEA LFEAHRTALR WEWLAGHAHP ERRFDEVAVR DAQSAADLVG YLNYIHPYRV
QIVGRREVRY LVDVPPEDQE RRISRIVTLE PPVVIVADQQ TPPDRLVAMC ERADIPLFVT
EESAGHVIDV LRAHLSQHFA DRTTRHGVFM DILGLGVLLT GESGLGKSEL GLELISRGHG
LVADDAVDLY RVSQTALEGR CPDLLLNLLE VRGIGLLDIK AIFGETAVRR KMRLKLIVHL
VRKETMERDF ERLPYEPLYE DVLDVPVLKA VIAVDAGRNL AVLVEAAVRN TILKLRGIDT
YQEFIARHRI AMEGDEPI
|
|---|
| |